FLJ27365

General Information

Gene Name       : FLJ27365
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FLJ27365)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FLJ27365 is not avaliable on ENCORE database.



Proteins bound to RNA

  • FLJ27365 RNA is bound by 5 proteins.  







eCLIP assay for FLJ27365 is not avaliable on ENCORE database.





5 proteins are bound to FLJ27365 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr224650960546509644+3'-UTR4.666217.21258K562LIN28B
chr224650864046508695+3'-UTR4.865253.88813HepG2DGCR8
chr224650876746508862+3'-UTR4.622484.70044HepG2DROSHA
chr224650865846508692+3'-UTR6.7068423.70453K562DGCR8
chr224650585746505900+3'-UTR,CDS3.430873.52314K562DGCR8
chr224650958846509644+3'-UTR5.8424312.11094K562DGCR8
chr224650876246508812+3'-UTR4.743733.46884K562DGCR8
chr224650944146509491+3'-UTR4.042843.37130HepG2DGCR8
chr224650884546508879+3'-UTR4.766635.30083K562DGCR8
chr224650851146508601+3'-UTR5.591188.30094K562DGCR8
chr224650947946509568+3'-UTR5.083674.65802K562DROSHA
chr224650876046508815+3'-UTR4.580894.96989HepG2DGCR8
chr224650583546505926+3'-UTR,CDS5.326395.19464K562DROSHA
chr224648454646484617+intron-Distal4.541154.42400K562SLTM
chr224649494246495026+intron-Distal4.033103.06347K562NONO
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FLJ27365 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FLJ27365 is not available on ENCORE database.

  • 1 RBPs can affect the levels of FLJ27365.  








The Knockdown/knockout RNA-Seq assay for FLJ27365 is not available on ENCORE database.





1 RBPs can affect the gene expression of FLJ27365 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FLJ27365ENSG00000197182.838.7677013.431501.529102.818001.91600K562HNRNPU
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FLJ27365 is not available on ENCORE database.






No RBPs affect the alternative splcing events of FLJ27365 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for FLJ27365 is not avaliable on ENCORE database.