FAM101A

General Information

Gene Name       : FAM101A
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FAM101A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FAM101A is not avaliable on ENCORE database.



Proteins bound to RNA
  • FAM101A RNA is bound by 24 proteins.  







eCLIP assay for FAM101A is not avaliable on ENCORE database.





24 proteins are bound to FAM101A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12124458426124458517+5'-UTR,intron-Proximal4.257014.31828HepG2SRSF1
chr12124458473124458539+5'-UTR4.8486319.79992K562DDX3X
chr12124458551124458616+5'-UTR,intron-Proximal3.992045.90868HepG2PRPF8
chr12124457856124457891+5'-UTR,intron-Distal,intron-Proximal6.3267419.89746HepG2DDX3X
chr12124457826124457851+5'-UTR,intron-Distal,intron-Proximal3.547728.35983K562DDX3X
chr12124458431124458470+5'-UTR,intron-Proximal5.1222011.79106HepG2DDX3X
chr12124457775124457856+5'-UTR,intron-Distal,intron-Proximal7.4703620.25233HepG2DDX3X
chr12124457891124457900+5'-UTR,intron-Distal,intron-Proximal5.9211611.05478HepG2DDX3X
chr12124457851124457892+5'-UTR,intron-Distal,intron-Proximal3.799213.33524K562DDX3X
chr12124457804124457826+5'-UTR,intron-Distal4.374874.66602K562DDX3X
chr12124457892124457899+5'-UTR,intron-Distal,intron-Proximal5.038953.69821K562DDX3X
chr12124458431124458473+5'-UTR,intron-Proximal4.8063917.81304K562DDX3X
chr12124498740124498831+3'-UTR,intron-Distal4.4703932.82099K562DDX6
chr12124491434124491524+intron-Distal4.406535.11328HepG2SUGP2
chr12124499367124499443+3'-UTR,intron-Distal3.859056.34120HepG2GRSF1
chr12124485403124485468+intron-Distal4.088734.28663HepG2SUGP2
chr12124497502124497561+3'-UTR,intron-Distal4.9012722.69508K562PUM2
chr12124497561124497639+3'-UTR,intron-Distal3.6589218.60674K562FAM120A
chr12124485064124485145+intron-Distal3.270024.08528HepG2SUGP2
chr12124457941124458030+5'-UTR,intron-Distal,intron-Proximal3.222924.87202HepG2FAM120A
chr12124498737124498840+3'-UTR,intron-Distal4.9419263.89719K562FAM120A
chr12124486841124486931+intron-Distal4.490713.86368HepG2HNRNPM
chr12124498736124498819+3'-UTR,intron-Distal3.444665.36952HepG2GTF2F1
chr12124495925124495956+3'-UTR,intron-Distal,intron-Proximal3.585188.70833K562YBX3
chr12124498805124498830+3'-UTR,intron-Distal3.367037.66288K562UPF1
chr12124711017124711044+intron-Distal5.182295.57517K562NSUN2
chr12124499301124499319+3'-UTR,intron-Distal3.529964.68114K562DDX55
chr12124497120124497173+CDS,intron-Distal3.650635.57640K562YBX3
chr12124497508124497561+3'-UTR,intron-Distal3.6555510.58114K562FAM120A
chr12124498228124498271+3'-UTR,intron-Distal3.352865.43523K562FAM120A
chr12124498413124498460+3'-UTR,intron-Distal3.550955.05222K562IGF2BP1
chr12124498734124498812+3'-UTR,intron-Distal3.561744.51358HepG2PCBP2
chr12124457963124458086+5'-UTR,intron-Distal,intron-Proximal4.338203.67126HepG2NKRF
chr12124474227124474315+intron-Distal4.190053.63454HepG2SUGP2
chr12124495927124495955+3'-UTR,intron-Distal,intron-Proximal3.754716.78159K562DDX3X
chr12124497510124497557+3'-UTR,intron-Distal4.343454.59164HepG2IGF2BP1
chr12124499279124499301+3'-UTR,intron-Distal3.594935.52205K562DDX55
chr12124498738124498784+3'-UTR,intron-Distal3.7989731.11282K562UPF1
chr12124472595124472674+5'-UTR,intron-Distal4.069657.70473HepG2DDX3X
chr12124499165124499200+3'-UTR,intron-Distal3.359496.28201K562FAM120A
chr12124457953124458045+5'-UTR,intron-Distal,intron-Proximal4.616644.42691HepG2GTF2F1
chr12124498736124498805+3'-UTR,intron-Distal3.164037.16798K562DDX55
chr12124498741124498789+3'-UTR,intron-Distal4.1891514.11909K562PABPC4
chr12124496180124496234+3'-UTR,intron-Distal3.531725.23852K562DDX3X
chr12124498784124498805+3'-UTR,intron-Distal3.2230913.47376K562UPF1
chr12124497953124498052+3'-UTR,intron-Distal3.323086.25772K562IGF2BP1
chr12124497829124497888+3'-UTR,intron-Distal3.159493.46707K562IGF2BP1
chr12124457940124458098+5'-UTR,intron-Distal,intron-Proximal4.6600813.23576HepG2PRPF4
chr12124497561124497609+3'-UTR,intron-Distal3.6270613.79051K562PUM2
chr12124499649124499747+3'-UTR,intron-Distal3.118587.21228HepG2DDX55
chr12124458029124458241+5'-UTR,intron-Distal,intron-Proximal3.739113.79442K562AQR
chr12124498069124498113+3'-UTR,intron-Distal3.535654.41952K562IGF2BP1
chr12124498966124499015+3'-UTR,intron-Distal4.195958.35622K562DDX55
chr12124458120124458227+5'-UTR,intron-Distal,intron-Proximal4.965407.66822HepG2PRPF4
chr12124461175124461257+intron-Distal5.528659.72328HepG2RBFOX2
chr12124496089124496203+3'-UTR,intron-Distal,intron-Proximal3.339987.40344HepG2PPIG
chr12124497546124497645+3'-UTR,intron-Distal4.1068011.59710K562UPF1
chr12124496120124496165+3'-UTR,intron-Distal4.201375.16762K562YBX3
chr12124473740124473805+intron-Distal,intron-Proximal3.427414.57452HepG2SUGP2
chr12124498232124498289+3'-UTR,intron-Distal3.705847.23578K562PUM2
chr12124498731124498839+3'-UTR,intron-Distal3.1944713.11226K562GTF2F1
chr12124458153124458238+5'-UTR,intron-Distal,intron-Proximal3.462276.46427HepG2SF3B4
chr12124458378124458427+5'-UTR,intron-Proximal3.403393.34848HepG2PPIG
chr12124458371124458427+5'-UTR,intron-Proximal6.202979.59560HepG2SF3A3
chr12124458361124458425+5'-UTR,intron-Proximal4.4291521.65922HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FAM101A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FAM101A is not available on ENCORE database.

  • No RBPs affect the gene expression of FAM101A on ENCORE database.


The Knockdown/knockout RNA-Seq assay for FAM101A is not available on ENCORE database.






No RBPs affect the gene expression of FAM101A on ENCORE database.






The Knockdown/knockout RNA-Seq assay for FAM101A is not available on ENCORE database.






No RBPs affect the alternative splcing events of FAM101A on ENCORE database.





The Knockdown/knockout RNA-Seq assay for FAM101A is not avaliable on ENCORE database.