CNGB1

General Information

Gene Name       : CNGB1
Gene ID             : ENSG00000070729.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CNGB1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CNGB1ENSG00000070729.130.000.000.00ENCSR000AEF
HepG2CNGB1ENSG00000070729.130.100.010.06ENCSR985KAT
K562CNGB1ENSG00000070729.130.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CNGB1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on CNGB1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CNGB1 is not avaliable on ENCORE database.






NO known proteins are bound to CNGB1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CNGB1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CNGB1 is not available on ENCORE database.

  • 11 RBPs can affect the levels of CNGB1.  








The Knockdown/knockout RNA-Seq assay for CNGB1 is not available on ENCORE database.





11 RBPs can affect the gene expression of CNGB1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CNGB1ENSG00000070729.923.936504.864202.298802.655301.69930HepG2DDX59
CNGB1ENSG00000070729.933.417702.055204.023206.467305.55340HepG2DDX6
CNGB1ENSG00000070729.926.569801.983003.743905.037004.24990HepG2EIF2S1
CNGB1ENSG00000070729.916.268802.970102.453402.060801.42980HepG2IGF2BP1
CNGB1ENSG00000070729.985.751007.052303.6039015.1402013.39660HepG2RBM15
CNGB1ENSG00000070729.938.989203.255303.582106.651005.65650HepG2RPLP0
CNGB1ENSG00000070729.916.491301.233203.741103.103402.45700HepG2RPS19
CNGB1ENSG00000070729.921.024006.140301.775601.985401.53950HepG2SRFBP1
CNGB1ENSG00000070729.990.8002015.415102.558303.338701.87020HepG2SUGP2
CNGB1ENSG00000070729.917.460300.978304.157502.525901.87620HepG2SUPV3L1
CNGB1ENSG00000070729.937.434101.530704.612008.993008.18310HepG2TIAL1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CNGB1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CNGB1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CNGB1 is not avaliable on ENCORE database.