AC069287.1

General Information

Gene Name       : AC069287.1
Gene ID             : ENSG00000254468.2
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AC069287.1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878AC069287.1ENSG00000254468.20.000.030.01ENCSR000AEF
HepG2AC069287.1ENSG00000254468.20.000.200.10ENCSR985KAT
K562AC069287.1ENSG00000254468.20.740.230.48ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AC069287.1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • AC069287.1 RNA is bound by 12 proteins.  







eCLIP assay for AC069287.1 is not avaliable on ENCORE database.





12 proteins are bound to AC069287.1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11203623203731-3'-UTR,intron-Distal3.147957.19744K562IGF2BP2
chr11204090204128-3'-UTR,intron-Distal,intron-Proximal4.286196.97411K562AKAP1
chr11203729203767-3'-UTR,intron-Distal3.797206.82724K562YBX3
chr11203406203426-3'-UTR,intron-Distal,intron-Proximal6.2585016.48629K562UPF1
chr11203256203386-3'-UTR,intron-Distal,intron-Proximal3.216179.65098K562CSTF2T
chr11203897203977-3'-UTR,intron-Distal,intron-Proximal3.7668911.23570HepG2HNRNPK
chr11204061204140-3'-UTR,intron-Distal,intron-Proximal4.174468.70559HepG2HNRNPK
chr11203671203704-3'-UTR,intron-Distal4.460447.33240HepG2PCBP2
chr11204296204336-3'-UTR,intron-Distal,intron-Proximal3.014904.37213K562AKAP1
chr11203861203977-3'-UTR,intron-Distal,intron-Proximal4.0348816.16451K562HNRNPK
chr11204249204346-3'-UTR,intron-Distal,intron-Proximal5.5126811.05965HepG2AKAP1
chr11203847203984-3'-UTR,intron-Distal,intron-Proximal4.3403521.09694K562PCBP1
chr11203937203960-3'-UTR,intron-Distal,intron-Proximal3.181607.58446K562ILF3
chr11203668203750-3'-UTR,intron-Distal5.0882812.46018K562PCBP1
chr11204025204157-3'-UTR,intron-Distal,intron-Proximal3.2812812.66045K562HNRNPK
chr11203914203983-3'-UTR,intron-Distal,intron-Proximal5.0030227.06535HepG2PCBP2
chr11203788203862-3'-UTR,intron-Distal5.2473734.65487K562UPF1
chr11204278204330-3'-UTR,intron-Distal,intron-Proximal4.587535.64948HepG2UPF1
chr11204055204151-3'-UTR,intron-Distal,intron-Proximal4.0539156.79420K562UPF1
chr11203872203936-3'-UTR,intron-Distal,intron-Proximal4.0843732.23273K562UPF1
chr11204458204502-3'-UTR,intron-Distal,intron-Proximal3.9202716.15695K562UPF1
chr11204231204308-3'-UTR,intron-Distal,intron-Proximal3.164835.39618K562HNRNPK
chr11204079204140-3'-UTR,intron-Distal,intron-Proximal5.5247510.29040HepG2AKAP1
chr11204267204331-3'-UTR,intron-Distal,intron-Proximal3.536324.09699HepG2HNRNPK
chr11203876203963-3'-UTR,intron-Distal,intron-Proximal3.477253.27682HepG2LARP4
chr11204005204055-3'-UTR,intron-Distal,intron-Proximal3.6531220.78144K562UPF1
chr11203650203716-3'-UTR,intron-Distal3.9022425.98851K562UPF1
chr11204067204139-3'-UTR,intron-Distal,intron-Proximal3.9622110.18537K562PCBP1
chr11203936203974-3'-UTR,intron-Distal,intron-Proximal3.2426816.31290K562UPF1
chr11203506203539-3'-UTR,intron-Distal4.3815816.54613K562UPF1
chr11204069204159-3'-UTR,intron-Distal,intron-Proximal4.704526.75776K562MATR3
chr11203648203745-3'-UTR,intron-Distal3.086494.47073K562IGF2BP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AC069287.1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AC069287.1 is not available on ENCORE database.

  • No RBPs affect the gene expression of AC069287.1 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for AC069287.1 is not available on ENCORE database.






No RBPs affect the gene expression of AC069287.1 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for AC069287.1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of AC069287.1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for AC069287.1 is not avaliable on ENCORE database.