AC005082.1

General Information

Gene Name       : AC005082.1
Gene ID             : ENSG00000226816.3
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AC005082.1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878AC005082.1ENSG00000226816.30.000.040.02ENCSR000AEF
HepG2AC005082.1ENSG00000226816.30.000.000.00ENCSR985KAT
K562AC005082.1ENSG00000226816.30.030.000.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AC005082.1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • AC005082.1 RNA is bound by 15 proteins.  







eCLIP assay for AC005082.1 is not avaliable on ENCORE database.





15 proteins are bound to AC005082.1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr72322835023228387+intron-Distal4.945796.40061K562ILF3
chr72322666823226780+5'-UTR,CDS,intron-Distal,intron-Proximal4.491349.30195HepG2BCLAF1
chr72323024823230301+intron-Distal3.966223.71397K562KHSRP
chr72322176223221816+CDS,intron-Distal3.831783.01428K562UCHL5
chr72322667023226771+5'-UTR,CDS,intron-Distal,intron-Proximal3.173684.09741HepG2PPIG
chr72322666823226779+5'-UTR,CDS,intron-Distal,intron-Proximal3.857878.54758K562ZNF622
chr72322672223226806+5'-UTR,CDS,intron-Distal,intron-Proximal4.206367.80986K562PRPF8
chr72322666823226777+5'-UTR,CDS,intron-Distal,intron-Proximal4.038554.47351K562GRWD1
chr72323360223233644+intron-Distal5.340586.79336K562DGCR8
chr72322667523226790+5'-UTR,CDS,intron-Distal,intron-Proximal3.742784.06757K562UCHL5
chr72322832623228350+intron-Distal4.235747.07933K562ILF3
chr72323006623230163+intron-Distal4.747166.80456K562KHSRP
chr72322831923228412+intron-Distal3.856633.24590HepG2ILF3
chr72322176723221831+CDS,intron-Distal,intron-Proximal3.308413.64266HepG2PPIG
chr72322481323224918+CDS,intron-Distal,intron-Proximal4.209244.88315K562GRWD1
chr72322483923224925+CDS,intron-Distal,intron-Proximal3.846594.46864HepG2BCLAF1
chr72323360323233674+intron-Distal4.540595.89204HepG2DGCR8
chr72322183923221951+intron-Distal,intron-Proximal5.535515.35117HepG2PRPF8
chr72322473023224918+CDS,intron-Distal,intron-Proximal3.204158.48432K562ZNF622
chr72322171923221824+CDS,intron-Distal3.115945.48399K562DDX3X
chr72323227423232393+intron-Distal5.370747.27881HepG2KHSRP
chr72322984923229948+intron-Distal3.156623.81590K562HNRNPL
chr72322486023224915+CDS,intron-Distal4.452255.40333K562RBM15
chr72322168623221827+5'-UTR,CDS,intron-Distal,intron-Proximal3.086794.88807HepG2NCBP2
chr72322669823226788+5'-UTR,CDS,intron-Distal,intron-Proximal4.450554.75655HepG2PRPF8
chr72322469723224790+CDS,intron-Distal3.380554.47973K562YBX3
chr72322480723224918+CDS,intron-Distal,intron-Proximal3.194723.80299HepG2GRWD1
chr72323226823232389+intron-Distal3.984094.12078HepG2FUS
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AC005082.1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AC005082.1 is not available on ENCORE database.

  • No RBPs affect the gene expression of AC005082.1 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for AC005082.1 is not available on ENCORE database.






No RBPs affect the gene expression of AC005082.1 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for AC005082.1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of AC005082.1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for AC005082.1 is not avaliable on ENCORE database.