SNRPC

General Information

Gene Name : SNRPC
Gene ID : ENSG00000124562.9
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SNRPC)

Not Available

Antibody Validation

Bethyl Labs: A303-947A

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SNRPC	ENSG00000124562.9	162.77	251.55	207.16	ENCSR000AEF
HepG2	SNRPC	ENSG00000124562.9	348.84	282.92	315.88	ENCSR985KAT
K562	SNRPC	ENSG00000124562.9	654.18	583.65	618.91	ENCSR000AEO

Assays

4 Released experiments are available on ENCORE database.

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Linked Antibody	Controls	Method	Note
eCLIP	eCLIP: 4187	ENCSR959OKB	SNRPC	HepG2	Released	ENCAB311PIH	ENCSR981NWK
eCLIP	eCLIP: 4164	ENCSR714FKK	SNRPC	K562	Released	ENCAB311PIH	ENCSR356XVB
knockdown followed by RNA-seq	SNRPC-BGKcLV23-K562	ENCSR840JRU	SNRPC	K562	Released		ENCSR877JEM	CRISPR	KD% = 68.1,68.7613052
knockdown followed by RNA-seq	SNRPC-BGHcLV22-HepG2	ENCSR005RUR	SNRPC	HepG2	Released		ENCSR704VPL	CRISPR	KD% = 75.6,73.9

eCLIP

RBP	Exp_UID	Cell_Line	ENCODE_ACCESSION	Control_ENCODE_ACCESSION	ENCODE_Antibody_ID	Antibody	Lot_num	Status	Project
SNRPC	4187	HepG2	ENCSR959OKB	ENCSR981NWK	ENCAB311PIH	A303-947A	1	Released	ENCODE4
SNRPC	4164	K562	ENCSR714FKK	ENCSR356XVB	ENCAB311PIH	A303-947A	1	Released	ENCODE4

Antibody Validation

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
SNRPC	ENCAB311PIH	A303-947A	1				BGHcLV22-53, Released, ENCODE4	BGKcLV23-61, Released, ENCODE4

KD RNA-Seq

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project
SNRPC	K562	CRISPR			BGKcLV21-45,BGKcLV21-46	BGKcLV21-1,BGKcLV21-2	30.6,28.0	NotSatisfied	ENCODE4
SNRPC	K562	CRISPR	ENCSR840JRU	ENCSR877JEM	SNRPC-BGKcLV23-61,SNRPC-BGKcLV23-62	NT-BGKcLV23-1,NT-BGKcLV23-2	68.1,68.7613052	Released	ENCODE4
SNRPC	HepG2	CRISPR	ENCSR005RUR	ENCSR704VPL	SNRPC-BGHcLV22-53,SNRPC-BGHcLV22-54	NT-BGHcLV22-1,NT-BGHcLV22-2	75.6,73.9	Released	ENCODE4
SNRPC	HepG2	CRISPR			BGHcLV22-55,BGHcLV22-56	BGHcLV22-1,BGHcLV22-2	67.4,76.5	NotSatisfied	ENCODE4
SNRPC	Ribo-STAMP-293T	shRNA			BGRSLV03-47,BGRSLV03-48	BGRSLV03-1,BGRSLV03-2		NotSatisfied	ENCORE2
SNRPC	Ribo-STAMP-293T	shRNA			BGRSLV04-55,BGRSLV04-56	BGRSLV04-1,BGRSLV04-2		NotSatisfied	ENCORE2
SNRPC	Ribo-STAMP-293T	shRNA			BGRSLV09-43,BGRSLV09-44	BGRSLV09-1,BGRSLV09-2		NotSatisfied	ENCORE2
SNRPC	Ribo-STAMP-293T	shRNA			BGRSLV09-45,BGRSLV09-46	BGRSLV09-1,BGRSLV09-2		NotSatisfied	ENCORE2

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela
SNRPC	Product_ID: A303-947A Lot_ID: 1 Source: Bethyl Labs Target Name: SNRPC-human

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SNRPC is not avaliable on ENCORE database.

Proteins bound to RNA

SNRPC RNA is bound by 19 proteins.

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eCLIP assay for SNRPC is not avaliable on ENCORE database.

19 proteins are bound to SNRPC RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	34741478	34741525	+	3'-UTR	3.48961	9.93776	K562	PABPC4
chr6	34741378	34741433	+	3'-UTR	4.24705	19.51754	HepG2	LARP4
chr6	34741382	34741478	+	3'-UTR	4.16014	10.53006	HepG2	DDX55
chr6	34741376	34741452	+	3'-UTR	3.93499	11.06619	K562	NOLC1
chr6	34741376	34741473	+	3'-UTR	5.55987	38.23527	HepG2	SUB1
chr6	34741433	34741478	+	3'-UTR	4.64957	16.20745	HepG2	LARP4
chr6	34741427	34741478	+	3'-UTR	3.68449	39.18724	K562	PABPC4
chr6	34730329	34730409	+	5'-UTR,CDS,intron-Proximal	3.89687	9.31583	K562	SF3B4
chr6	34725326	34725367	+	5'-UTR,CDS,intron-Proximal	4.57499	4.97857	HepG2	AQR
chr6	34730371	34730384	+	5'-UTR,CDS,intron-Proximal	3.20009	15.81839	K562	YBX3
chr6	34725313	34725329	+	5'-UTR,CDS,intron-Proximal	4.43727	19.85118	K562	DDX3X
chr6	34730371	34730402	+	5'-UTR,CDS,intron-Proximal	3.04584	21.16154	K562	DDX3X
chr6	34725283	34725313	+	5'-UTR	4.22685	18.44818	K562	DDX3X
chr6	34725334	34725386	+	5'-UTR,intron-Proximal	5.54985	28.30163	K562	AQR
chr6	34730370	34730428	+	5'-UTR,CDS,intron-Proximal	3.31716	8.80002	K562	GRWD1
chr6	34725344	34725398	+	5'-UTR,intron-Proximal	4.67691	7.44508	K562	PRPF8
chr6	34725372	34725397	+	5'-UTR,intron-Proximal	3.77587	4.97821	K562	BUD13
chr6	34725479	34725503	+	5'-UTR,intron-Distal	3.93961	3.64144	K562	EFTUD2
chr6	34725328	34725334	+	5'-UTR,intron-Proximal	5.60459	18.59418	K562	AQR
chr6	34725326	34725372	+	5'-UTR,CDS,intron-Proximal	4.20105	11.70689	HepG2	PRPF8
chr6	34735702	34735746	+	CDS	3.30768	38.48385	K562	YBX3
chr6	34725692	34725732	+	CDS,intron-Distal,intron-Proximal	3.82273	9.05952	HepG2	SUB1
chr6	34738065	34738115	+	CDS,intron-Proximal	4.05152	8.12409	K562	PCBP1
chr6	34741206	34741265	+	CDS,intron-Proximal	3.01038	4.70628	K562	U2AF2
chr6	34725674	34725754	+	CDS,intron-Distal,intron-Proximal	3.57335	9.48572	K562	EFTUD2
chr6	34725696	34725734	+	CDS,intron-Distal,intron-Proximal	4.28251	3.95187	HepG2	AQR
chr6	34738068	34738080	+	CDS	4.15146	5.75263	HepG2	LARP4
chr6	34741222	34741261	+	CDS,intron-Proximal	4.26029	7.95716	HepG2	G3BP1
chr6	34738066	34738115	+	CDS,intron-Proximal	4.95194	42.69964	K562	RPS3
chr6	34735753	34735775	+	CDS,intron-Proximal	4.13691	16.61760	K562	RPS3
chr6	34735665	34735708	+	CDS,intron-Proximal	3.63703	6.62600	K562	U2AF2
chr6	34741201	34741263	+	CDS,intron-Proximal	3.90294	17.88439	HepG2	U2AF2
chr6	34725649	34725709	+	CDS,intron-Distal,intron-Proximal	3.26427	15.13178	K562	AQR
chr6	34725697	34725732	+	CDS,intron-Distal,intron-Proximal	3.21447	6.37916	K562	GRWD1
chr6	34738152	34738172	+	CDS	3.66045	4.86632	HepG2	G3BP1
chr6	34735728	34735774	+	CDS	3.12794	7.34484	K562	PCBP1
chr6	34725690	34725732	+	CDS,intron-Distal,intron-Proximal	3.68941	29.31166	K562	DDX3X
chr6	34725688	34725690	+	CDS,intron-Distal,intron-Proximal	3.60088	8.23377	K562	DDX3X
chr6	34725663	34725726	+	CDS,intron-Distal,intron-Proximal	3.22757	7.34034	HepG2	U2AF2
chr6	34738069	34738103	+	CDS	3.20290	4.70577	HepG2	G3BP1
chr6	34741271	34741326	+	CDS	5.79918	14.16859	HepG2	LARP4
chr6	34735746	34735774	+	CDS	3.21412	23.40612	K562	YBX3
chr6	34741187	34741245	+	CDS,intron-Proximal	3.17957	6.52492	K562	SF3B4
chr6	34741274	34741335	+	CDS	4.25862	29.66390	K562	RPS3
chr6	34741204	34741264	+	CDS,intron-Proximal	3.71018	6.41587	HepG2	U2AF1
chr6	34725694	34725733	+	CDS,intron-Distal,intron-Proximal	3.19121	22.02137	K562	YBX3
chr6	34738067	34738118	+	CDS,intron-Proximal	3.87806	5.15615	HepG2	RPS3
chr6	34740198	34740259	+	intron-Distal	4.71437	6.34785	K562	KHSRP
chr6	34740259	34740319	+	intron-Distal	4.01972	8.20650	K562	KHSRP
chr6	34740729	34740830	+	intron-Distal,intron-Proximal	4.45855	4.79379	K562	KHSRP
chr6	34725806	34725848	+	intron-Distal,intron-Proximal	4.66070	5.33214	K562	PRPF8
chr6	34725791	34725834	+	intron-Distal,intron-Proximal	3.97758	4.10688	K562	KHSRP
chr6	34740968	34741122	+	intron-Distal	3.89814	9.20203	K562	KHSRP
chr6	34740626	34740706	+	intron-Distal,intron-Proximal	3.39656	3.93901	K562	KHSRP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for SNRPC is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SNRPC is not available on ENCORE database.
93 RBPs can affect the levels of SNRPC.

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The Knockdown/knockout RNA-Seq assay for SNRPC is not available on ENCORE database.

93 RBPs can affect the gene expression of SNRPC :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SNRPC	ENSG00000124562.5	2307.92100	2842.70830	-0.30070	4.45540	3.62060	HepG2	AUH
SNRPC	ENSG00000124562.5	1172.45480	1695.89690	-0.53250	4.80240	3.64700	HepG2	BCLAF1
SNRPC	ENSG00000124562.5	1509.80120	2476.04160	-0.71370	8.93580	7.90900	HepG2	EIF2S1
SNRPC	ENSG00000124562.5	1902.64630	2664.27920	-0.48570	3.24780	2.50530	HepG2	EIF4B
SNRPC	ENSG00000124562.5	2239.66860	2981.07220	-0.41250	7.96110	6.67980	HepG2	EIF4G1
SNRPC	ENSG00000124562.5	2271.82640	2855.67030	-0.33000	2.14750	1.42370	HepG2	EIF4G2
SNRPC	ENSG00000124562.5	2520.39320	3263.84950	-0.37290	7.25790	6.36160	HepG2	ETF1
SNRPC	ENSG00000124562.5	2115.65560	1679.85310	0.33270	3.20250	2.30570	HepG2	EWSR1
SNRPC	ENSG00000124562.5	1877.25800	3267.86680	-0.79970	3.30540	2.19120	HepG2	FTO
SNRPC	ENSG00000124562.5	1706.26110	2033.55710	-0.25320	2.05230	1.36690	HepG2	FUBP3
SNRPC	ENSG00000124562.5	1951.44130	2561.10090	-0.39220	2.97480	2.28610	HepG2	G3BP1
SNRPC	ENSG00000124562.5	2377.14950	3698.87940	-0.63790	2.40240	1.80190	HepG2	GPKOW
SNRPC	ENSG00000124562.5	2314.31610	2776.99730	-0.26290	3.41710	2.39350	HepG2	HNRNPA2B1
SNRPC	ENSG00000124562.5	1447.35450	1875.39010	-0.37380	3.40660	2.64410	HepG2	HNRNPC
SNRPC	ENSG00000124562.5	2634.34600	3012.49700	-0.19350	1.97210	1.35970	HepG2	HNRNPF
SNRPC	ENSG00000124562.5	2163.31320	1862.99100	0.21550	2.48830	1.91260	HepG2	HNRNPU
SNRPC	ENSG00000124562.5	1857.40300	2603.24820	-0.48700	4.62160	3.76910	HepG2	IGF2BP2
SNRPC	ENSG00000124562.5	1781.24530	2618.52550	-0.55590	4.32770	3.04530	HepG2	KHSRP
SNRPC	ENSG00000124562.5	2170.05170	2761.98980	-0.34800	2.62040	1.98190	HepG2	MAGOH
SNRPC	ENSG00000124562.5	2093.11630	2842.78520	-0.44170	3.77160	3.03620	HepG2	NCBP2
SNRPC	ENSG00000124562.5	917.61540	1762.37270	-0.94160	6.85100	5.10890	HepG2	NONO
SNRPC	ENSG00000124562.5	1454.75310	3129.57650	-1.10520	5.06620	4.06700	HepG2	NSUN2
SNRPC	ENSG00000124562.5	1263.36540	2531.50750	-1.00270	16.24370	14.55290	HepG2	PABPC4
SNRPC	ENSG00000124562.5	1976.79880	2489.00750	-0.33240	4.99640	4.21800	HepG2	PCBP1
SNRPC	ENSG00000124562.5	1645.83050	2532.78730	-0.62190	15.16520	14.08320	HepG2	PTBP1
SNRPC	ENSG00000124562.5	2452.99310	3034.01800	-0.30670	3.46980	2.72270	HepG2	PUM2
SNRPC	ENSG00000124562.5	1639.18710	2742.79610	-0.74270	17.09610	15.73470	HepG2	QKI
SNRPC	ENSG00000124562.5	2098.08840	2727.96590	-0.37880	5.74920	5.07080	HepG2	RBM22
SNRPC	ENSG00000124562.5	903.08190	2489.36770	-1.46290	46.58260	44.14550	HepG2	RBM25
SNRPC	ENSG00000124562.5	1968.56290	2818.64180	-0.51790	11.37000	10.41580	HepG2	NELFE
SNRPC	ENSG00000124562.5	2057.49210	2625.37630	-0.35160	5.66500	4.82200	HepG2	RECQL
SNRPC	ENSG00000124562.5	1106.67460	1464.22340	-0.40390	2.81400	2.02170	HepG2	RRP9
SNRPC	ENSG00000124562.5	2075.36860	3494.13170	-0.75160	3.10060	2.35500	HepG2	SF3B1
SNRPC	ENSG00000124562.5	1893.33610	2636.72710	-0.47780	9.80090	8.78880	HepG2	SF3B4
SNRPC	ENSG00000124562.5	2180.50910	2742.51410	-0.33080	6.57090	5.56320	HepG2	SLBP
SNRPC	ENSG00000124562.5	2654.51410	3081.12240	-0.21500	3.05130	2.53340	HepG2	SRFBP1
SNRPC	ENSG00000124562.5	3098.46660	2752.26670	0.17080	2.10420	1.67580	HepG2	SRSF1
SNRPC	ENSG00000124562.5	2056.50500	2824.04830	-0.45760	9.54450	8.47600	HepG2	SRSF5
SNRPC	ENSG00000124562.5	2531.31220	2959.60500	-0.22550	2.65080	1.96940	HepG2	SRSF7
SNRPC	ENSG00000124562.5	1552.86380	2239.19690	-0.52810	12.10270	11.09210	HepG2	SRSF9
SNRPC	ENSG00000124562.5	2295.09650	2675.11790	-0.22100	2.88360	2.36290	HepG2	SSB
SNRPC	ENSG00000124562.5	1295.36250	1799.38420	-0.47410	2.69030	1.50470	HepG2	SUB1
SNRPC	ENSG00000124562.5	1911.61870	2413.37190	-0.33630	3.22490	2.21530	HepG2	SUPT6H
SNRPC	ENSG00000124562.5	1887.53880	2474.10670	-0.39040	5.48790	4.74430	HepG2	TAF15
SNRPC	ENSG00000124562.5	2301.11750	3439.33570	-0.57980	2.27190	1.60600	HepG2	TARDBP
SNRPC	ENSG00000124562.5	1804.95220	2273.08890	-0.33270	3.44440	2.51530	HepG2	TIA1
SNRPC	ENSG00000124562.5	2420.91380	1810.24090	0.41930	3.44640	2.90100	HepG2	TIAL1
SNRPC	ENSG00000124562.5	1598.96160	1826.42640	-0.19190	1.92650	1.43940	HepG2	TRIM56
SNRPC	ENSG00000124562.5	1629.13220	2957.75430	-0.86040	11.73640	9.97180	HepG2	UBE2L3
SNRPC	ENSG00000124562.5	3429.45080	2528.06380	0.43980	10.22320	9.18770	HepG2	UTP3
SNRPC	ENSG00000124562.5	1969.25190	2258.01020	-0.19740	2.44770	1.80980	HepG2	ZC3H8
SNRPC	ENSG00000124562.5	2438.57270	2879.85310	-0.24000	4.18610	3.55140	HepG2	ZNF622
SNRPC	ENSG00000124562.5	7660.94420	5043.62800	0.60300	21.77600	20.29220	K562	AGGF1
SNRPC	ENSG00000124562.5	6837.30270	5248.05100	0.38150	3.49310	2.75520	K562	AKAP8L
SNRPC	ENSG00000124562.5	7474.47640	5511.24350	0.43950	4.07940	3.39420	K562	AQR
SNRPC	ENSG00000124562.5	2833.52820	3744.37410	-0.40210	5.88820	4.47080	K562	BCLAF1
SNRPC	ENSG00000124562.5	5405.30890	7163.16040	-0.40620	2.33030	1.53610	K562	BOP1
SNRPC	ENSG00000124562.5	6820.17170	8033.75190	-0.23630	3.60390	2.33400	K562	CPEB4
SNRPC	ENSG00000124562.5	5113.21130	7616.45080	-0.57490	11.52880	9.91200	K562	CPSF6
SNRPC	ENSG00000124562.5	4210.72070	4884.62110	-0.21420	2.72350	1.52300	K562	DDX21
SNRPC	ENSG00000124562.5	7337.87900	5647.73370	0.37760	7.07010	5.56180	K562	DKC1
SNRPC	ENSG00000124562.5	3981.20410	5022.87340	-0.33530	5.63950	4.66700	K562	EIF2S2
SNRPC	ENSG00000124562.5	3087.53470	2503.75080	0.30230	3.57990	2.68140	K562	EIF3G
SNRPC	ENSG00000124562.5	2969.99790	2279.36300	0.38170	5.37020	3.45620	K562	EWSR1
SNRPC	ENSG00000124562.5	5818.74850	7749.64310	-0.41340	4.83140	3.69870	K562	FMR1
SNRPC	ENSG00000124562.5	4300.82360	6568.55850	-0.61100	8.03080	6.38460	K562	FTO
SNRPC	ENSG00000124562.5	4035.15320	2715.61960	0.57120	14.24430	12.97750	K562	FXR1
SNRPC	ENSG00000124562.5	4152.94470	6239.25610	-0.58720	3.81040	1.30950	K562	FXR2
SNRPC	ENSG00000124562.5	2249.03960	2987.62360	-0.40970	3.43340	1.82220	K562	GEMIN5
SNRPC	ENSG00000124562.5	5178.39760	7271.80100	-0.48980	7.21860	5.93530	K562	GPKOW
SNRPC	ENSG00000124562.5	3549.10840	4464.09540	-0.33090	3.83950	2.57720	K562	HNRNPA1
SNRPC	ENSG00000124562.5	2811.11180	4584.67000	-0.70570	14.54850	13.26710	K562	HNRNPC
SNRPC	ENSG00000124562.5	4067.56610	2928.11740	0.47410	4.99660	3.28280	K562	HNRNPK
SNRPC	ENSG00000124562.5	2411.78320	3139.48690	-0.38040	3.08630	1.50170	K562	ILF3
SNRPC	ENSG00000124562.5	6614.48480	5569.74800	0.24790	2.27850	1.53910	K562	KIF1C
SNRPC	ENSG00000124562.5	6434.96050	5331.41320	0.27130	2.26460	1.32350	K562	MAK16
SNRPC	ENSG00000124562.5	7706.89330	6239.48920	0.30460	2.60950	1.73030	K562	MBNL1
SNRPC	ENSG00000124562.5	4913.40470	7098.10400	-0.53070	8.45650	6.86810	K562	METAP2
SNRPC	ENSG00000124562.5	4535.09960	5603.96450	-0.30530	4.54840	3.53360	K562	MTPAP
SNRPC	ENSG00000124562.5	6045.55970	4373.40770	0.46700	3.51970	2.49800	K562	NAA15
SNRPC	ENSG00000124562.5	4261.08760	6226.87840	-0.54730	13.17270	11.71310	K562	NSUN2
SNRPC	ENSG00000124562.5	6592.84230	4058.99180	0.69970	2.51600	1.58380	K562	PABPN1
SNRPC	ENSG00000124562.5	3468.18610	2741.52380	0.33910	3.32610	2.25360	K562	PCBP2
SNRPC	ENSG00000124562.5	4502.69090	5671.99940	-0.33310	2.66430	1.85030	K562	PCBP3
SNRPC	ENSG00000124562.5	3285.80470	4350.67640	-0.40500	5.78810	4.63370	K562	POLR2G
SNRPC	ENSG00000124562.5	4803.51090	2899.87520	0.72800	12.25860	10.67320	K562	PRPF8
SNRPC	ENSG00000124562.5	3723.44790	2993.78410	0.31460	3.45970	2.72780	K562	PTBP1
SNRPC	ENSG00000124562.5	8187.98910	5205.14580	0.65350	10.89850	9.86900	K562	PUS1
SNRPC	ENSG00000124562.5	6345.84600	5071.20010	0.32340	3.80660	3.12720	K562	RBM15
SNRPC	ENSG00000124562.5	3919.99610	2954.01700	0.40810	3.51430	2.59040	K562	RPS19
SNRPC	ENSG00000124562.5	6224.11410	3710.96170	0.74600	2.91360	1.66650	K562	SF1
SNRPC	ENSG00000124562.5	4736.25340	6143.78870	-0.37540	5.03020	3.95650	K562	SF3A3
SNRPC	ENSG00000124562.5	3273.13890	2566.26930	0.35090	4.45080	3.35590	K562	SF3B4
SNRPC	ENSG00000124562.5	7534.04890	4263.50760	0.82130	2.75040	1.52530	K562	SNRNP200
SNRPC	ENSG00000124562.5	4421.39750	3555.19980	0.31450	3.00200	1.92170	K562	SRFBP1
SNRPC	ENSG00000124562.5	4992.17170	6294.39440	-0.33440	6.51780	5.15160	K562	SRPK2
SNRPC	ENSG00000124562.5	3885.35610	2934.98220	0.40460	5.32040	4.34550	K562	SRSF1
SNRPC	ENSG00000124562.5	2100.16620	2808.00580	-0.41900	3.32780	2.20450	K562	SUPV3L1
SNRPC	ENSG00000124562.5	3071.06170	2392.41990	0.36020	2.67270	1.60140	K562	U2AF1
SNRPC	ENSG00000124562.5	2881.36490	2470.57870	0.22180	2.03090	1.34360	K562	U2AF2
SNRPC	ENSG00000124562.5	2209.52250	2971.77830	-0.42760	3.96390	2.72210	K562	UCHL5
SNRPC	ENSG00000124562.5	4870.80150	6602.46180	-0.43880	7.68840	6.56470	K562	UPF1
SNRPC	ENSG00000124562.5	3892.78290	5649.56590	-0.53730	9.31000	7.66510	K562	WDR3
SNRPC	ENSG00000124562.5	4642.46270	6208.91020	-0.41940	5.27480	4.01900	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SNRPC is not available on ENCORE database.

7 RBPs can affect the splicing of SNRPC :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	SNRPC	ENSG00000124562.5	chr6	+	34725625	34725731			34725182	34725328	34730371	34730480	-0.09700	0.00000	0.00000	excluded	K562	SF3B4
SE	SNRPC	ENSG00000124562.5	chr6	+	34725625	34725731			34725182	34725328	34730371	34730480	-0.05700	0.00000	0.00000	excluded	HepG2	U2AF2
SE	SNRPC	ENSG00000124562.5	chr6	+	34725625	34725731			34725182	34725328	34730371	34730619	-0.14300	0.00000	0.00000	excluded	K562	AQR
SE	SNRPC	ENSG00000124562.5	chr6	+	34725625	34725731			34725182	34725328	34730371	34730480	-0.05100	0.00000	0.00001	excluded	HepG2	CDC40
SE	SNRPC	ENSG00000124562.5	chr6	+	34725625	34725731			34725182	34725328	34730371	34730480	-0.13500	0.00000	0.00000	excluded	HepG2	SF3A3
SE	SNRPC	ENSG00000124562.5	chr6	+	34725688	34725731			34725182	34725328	34730371	34730480	-0.06900	0.00000	0.00000	excluded	K562	SF3B1
MXE	SNRPC	ENSG00000124562.5	chr6	+	34725688	34725731	34730324	34730480	34725182	34725328	34735684	34735774	-0.09800	0.00046	0.00465	2included	K562	AQR
MXE	SNRPC	ENSG00000124562.5	chr6	+	34725688	34725731	34730301	34730480	34725182	34725328	34735684	34735774	-0.09800	0.00048	0.00476	2included	K562	AQR
MXE	SNRPC	ENSG00000124562.5	chr6	+	34730371	34730480	34735684	34735774	34725688	34725731	34738067	34738172	-0.07700	0.00006	0.00265	2included	K562	PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SNRPC

General Information

Functions

Localization

Domains (AlphaFold: SNRPC)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SNRPC is not avaliable on ENCORE database.

19 proteins are bound to SNRPC RNA:

eCLIP assay for SNRPC is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SNRPC is not available on ENCORE database.

93 RBPs can affect the gene expression of SNRPC :

The Knockdown/knockout RNA-Seq assay for SNRPC is not available on ENCORE database.

7 RBPs can affect the splicing of SNRPC :

The Knockdown/knockout RNA-Seq assay for SNRPC is not avaliable on ENCORE database.