ZDHHC3

General Information

Gene Name : ZDHHC3
Gene ID : ENSG00000163812.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ZDHHC3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ZDHHC3	ENSG00000163812.13	25.42	32.55	28.98	ENCSR000AEF
HepG2	ZDHHC3	ENSG00000163812.13	41.84	33.22	37.53	ENCSR985KAT
K562	ZDHHC3	ENSG00000163812.13	71.04	67.54	69.29	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ZDHHC3 is not avaliable on ENCORE database.

Proteins bound to RNA

ZDHHC3 RNA is bound by 12 proteins.

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eCLIP assay for ZDHHC3 is not avaliable on ENCORE database.

12 proteins are bound to ZDHHC3 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	44974637	44974693	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.26860	17.76792	K562	PUM2
chr3	45017490	45017575	-	5'-UTR,intron-Distal	4.75105	11.73310	HepG2	DDX3X
chr3	45017575	45017646	-	5'-UTR,intron-Distal	4.87398	11.72256	HepG2	DDX3X
chr3	45000694	45000738	-	CDS,intron-Distal	3.98405	11.47083	K562	YBX3
chr3	44960050	44960198	-	intron-Distal	4.07977	8.41580	K562	RBFOX2
chr3	45017481	45017654	-	5'-UTR,intron-Distal	5.22196	8.39621	K562	DDX3X
chr3	45017428	45017490	-	5'-UTR,intron-Distal	4.50895	8.20930	HepG2	DDX3X
chr3	45000622	45000828	-	CDS,intron-Distal,intron-Proximal	5.12944	7.65871	K562	METAP2
chr3	45000623	45000682	-	CDS,intron-Distal	3.91014	6.82724	K562	YBX3
chr3	44966707	44966861	-	3'-UTR,intron-Distal	3.32907	6.38942	K562	FAM120A
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 21 entries

eCLIP assay for ZDHHC3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ZDHHC3 is not available on ENCORE database.
50 RBPs can affect the levels of ZDHHC3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ZDHHC3 is not available on ENCORE database.

50 RBPs can affect the gene expression of ZDHHC3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ZDHHC3	ENSG00000163812.9	1838.59050	943.15170	0.96290	26.76470	25.00690	K562	FXR1
ZDHHC3	ENSG00000163812.9	2272.12790	3718.19770	-0.71060	11.47720	9.10750	K562	ABCF1
ZDHHC3	ENSG00000163812.9	816.60770	1255.49930	-0.62050	10.14560	8.73840	HepG2	EIF4G1
ZDHHC3	ENSG00000163812.9	2553.21660	1757.40360	0.53880	8.81030	7.34310	K562	SYNCRIP
ZDHHC3	ENSG00000163812.9	751.72740	1273.54500	-0.76060	7.98320	6.93390	HepG2	NCBP2
ZDHHC3	ENSG00000163812.9	1668.52130	2352.84170	-0.49580	7.18510	5.91370	K562	CPSF6
ZDHHC3	ENSG00000163812.9	935.36660	1316.07440	-0.49260	6.03900	5.16590	HepG2	QKI
ZDHHC3	ENSG00000163812.9	1911.75870	1530.13130	0.32110	4.78720	4.18000	HepG2	SRFBP1
ZDHHC3	ENSG00000163812.9	877.58960	1137.95420	-0.37480	5.00020	4.14210	HepG2	ZC3H8
ZDHHC3	ENSG00000163812.9	2364.94370	1561.20410	0.59900	5.58900	4.05090	K562	SAFB
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 53 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ZDHHC3 is not available on ENCORE database.

8 RBPs can affect the splicing of ZDHHC3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ZDHHC3	ENSG00000163812.9	chr3	-	45000079	45000285			44986659	44986784	45000622	45000952	0.06400	0.00000	0.00003	included	K562	AQR
SE	ZDHHC3	ENSG00000163812.9	chr3	-	44974398	44974482			44970797	44970928	44974609	44974691	-0.16000	0.00002	0.00618	excluded	HepG2	HNRNPA1
SE	ZDHHC3	ENSG00000163812.9	chr3	-	44974398	44974482			44970797	44970928	44974609	44974691	-0.13900	0.00008	0.01508	excluded	HepG2	SSB
MXE	ZDHHC3	ENSG00000163812.9	chr3	-	44970797	44970928	44974398	44974482	44966337	44968339	44974609	44974691	-0.11400	0.00010	0.01411	2included	HepG2	SSB
SE	ZDHHC3	ENSG00000163812.9	chr3	-	44974398	44974482			44970797	44970928	44974609	44974941	-0.13300	0.00032	0.06876	excluded	HepG2	DKC1
SE	ZDHHC3	ENSG00000163812.9	chr3	-	44974398	44974482			44970797	44970928	44974609	44974691	0.13600	0.00053	0.07664	included	HepG2	TIA1
SE	ZDHHC3	ENSG00000163812.9	chr3	-	44974398	44974482			44970797	44970928	44974609	44974691	0.11000	0.00172	0.07784	included	HepG2	PTBP1
SE	ZDHHC3	ENSG00000163812.9	chr3	-	44974398	44974482			44970797	44970928	44974609	44974691	-0.18100	0.00585	0.05997	excluded	HepG2	U2AF2
SE	ZDHHC3	ENSG00000163812.9	chr3	-	44974398	44974482			44970797	44970928	44974609	44974691	-0.06600	0.00646	0.09243	excluded	HepG2	U2AF1
SE	ZDHHC3	ENSG00000163812.9	chr3	-	44974398	44974482			44970797	44970928	44974609	44974691	0.10400	0.00690	0.06057	included	K562	AQR

Showing 1 to 10 of 11 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ZDHHC3

General Information

Functions

Localization

Domains (AlphaFold: ZDHHC3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ZDHHC3 is not avaliable on ENCORE database.

12 proteins are bound to ZDHHC3 RNA:

eCLIP assay for ZDHHC3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ZDHHC3 is not available on ENCORE database.

50 RBPs can affect the gene expression of ZDHHC3 :

The Knockdown/knockout RNA-Seq assay for ZDHHC3 is not available on ENCORE database.

8 RBPs can affect the splicing of ZDHHC3 :

The Knockdown/knockout RNA-Seq assay for ZDHHC3 is not avaliable on ENCORE database.