TEX30

General Information

Gene Name : TEX30
Gene ID : ENSG00000151287.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TEX30)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TEX30	ENSG00000151287.16	16.26	15.87	16.07	ENCSR000AEF
HepG2	TEX30	ENSG00000151287.16	1.03	1.08	1.06	ENCSR985KAT
K562	TEX30	ENSG00000151287.16	21.79	20.31	21.05	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TEX30 is not avaliable on ENCORE database.

Proteins bound to RNA

TEX30 RNA is bound by 2 proteins.

CanvasJS.com

eCLIP assay for TEX30 is not avaliable on ENCORE database.

2 proteins are bound to TEX30 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr13	103426029	103426084	-	5'-UTR,intron-Distal	4.37017	12.22508	K562	DDX3X
chr13	103421660	103421728	-	CDS,intron-Distal,intron-Proximal	6.60276	11.45561	K562	PUM2
chr13	103422384	103422437	-	5'-UTR,intron-Distal,intron-Proximal	4.04719	7.22925	K562	DDX3X
chr13	103418505	103418552	-	3'-UTR,intron-Distal	3.65535	4.33997	K562	PUM2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 4 of 4 entries

eCLIP assay for TEX30 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TEX30 is not available on ENCORE database.
23 RBPs can affect the levels of TEX30.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TEX30 is not available on ENCORE database.

23 RBPs can affect the gene expression of TEX30 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TEX30	ENSG00000151287.12	197.34230	329.73050	-0.74060	5.62740	4.34050	K562	HNRNPU
TEX30	ENSG00000151287.12	167.74640	279.02000	-0.73410	5.14000	4.16760	K562	NSUN2
TEX30	ENSG00000151287.12	413.78500	242.03000	0.77360	5.29440	3.95620	K562	HNRNPM
TEX30	ENSG00000151287.12	331.35300	210.20890	0.65640	4.50290	3.75670	K562	FXR1
TEX30	ENSG00000151287.12	171.61430	275.37480	-0.68220	4.18250	3.19390	K562	SF3A3
TEX30	ENSG00000151287.12	860.66040	622.91700	0.46630	4.00590	2.70040	K562	PUM1
TEX30	ENSG00000151287.12	185.91570	282.13230	-0.60170	3.30760	2.29410	K562	SRPK2
TEX30	ENSG00000151287.12	463.35820	345.22970	0.42450	3.02430	2.27770	K562	EIF2S2
TEX30	ENSG00000151287.12	210.31140	333.49770	-0.66510	2.78650	2.07690	K562	TARDBP
TEX30	ENSG00000151287.12	128.74140	213.08240	-0.72690	2.86580	2.05690	K562	GPKOW
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 24 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TEX30 is not available on ENCORE database.

25 RBPs can affect the splicing of TEX30 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TEX30	ENSG00000151287.12	chr13	-	103419622	103419828	103418459	103418930	103420609	103420661	-0.43700	0.00000	0.00000	excluded	K562	SF3B4
SE	TEX30	ENSG00000151287.12	chr13	-	103422361	103422436	103421660	103421891	103426031	103426161	0.45800	0.00000	0.00015	included	K562	XRCC6
SE	TEX30	ENSG00000151287.12	chr13	-	103422361	103422436	103421660	103421891	103426031	103426161	0.35000	0.00000	0.00014	included	K562	FXR1
SE	TEX30	ENSG00000151287.12	chr13	-	103419622	103419828	103418459	103418930	103420609	103420661	-0.26400	0.00000	0.00021	excluded	K562	FXR1
SE	TEX30	ENSG00000151287.12	chr13	-	103422361	103422436	103421660	103421891	103426031	103426161	0.36300	0.00000	0.00022	included	K562	HNRNPL
SE	TEX30	ENSG00000151287.12	chr13	-	103422361	103422436	103421660	103421891	103426031	103426161	0.34800	0.00000	0.00103	included	K562	UPF1
SE	TEX30	ENSG00000151287.12	chr13	-	103419622	103419828	103418459	103418930	103420609	103420661	0.28200	0.00000	0.00000	included	K562	HNRNPU
SE	TEX30	ENSG00000151287.12	chr13	-	103422361	103422436	103421660	103421891	103426031	103426161	0.29100	0.00002	0.00065	included	K562	SRSF1
SE	TEX30	ENSG00000151287.12	chr13	-	103422361	103422436	103421660	103421891	103426031	103426161	0.27700	0.00002	0.00927	included	K562	WDR43
SE	TEX30	ENSG00000151287.12	chr13	-	103419622	103419828	103418459	103418930	103420609	103420661	0.16100	0.00002	0.00719	included	K562	ZC3H8

Showing 1 to 10 of 28 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TEX30

General Information

Functions

Localization

Domains (AlphaFold: TEX30)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TEX30 is not avaliable on ENCORE database.

2 proteins are bound to TEX30 RNA:

eCLIP assay for TEX30 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TEX30 is not available on ENCORE database.

23 RBPs can affect the gene expression of TEX30 :

The Knockdown/knockout RNA-Seq assay for TEX30 is not available on ENCORE database.

25 RBPs can affect the splicing of TEX30 :

The Knockdown/knockout RNA-Seq assay for TEX30 is not avaliable on ENCORE database.