RP5-1000K24.2

General Information

Gene Name : RP5-1000K24.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP5-1000K24.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP5-1000K24.2 is not avaliable on ENCORE database.

Proteins bound to RNA

RP5-1000K24.2 RNA is bound by 1 proteins.

CanvasJS.com

eCLIP assay for RP5-1000K24.2 is not avaliable on ENCORE database.

1 proteins are bound to RP5-1000K24.2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	77193331	77193472	+	intron-Distal	3.50157	6.43604	K562	HNRNPL
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 1 of 1 entries

eCLIP assay for RP5-1000K24.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP5-1000K24.2 is not available on ENCORE database.
43 RBPs can affect the levels of RP5-1000K24.2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RP5-1000K24.2 is not available on ENCORE database.

43 RBPs can affect the gene expression of RP5-1000K24.2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP5-1000K24.2	ENSG00000248503.2	812.25390	132.64480	2.61430	72.23140	69.38000	K562	AGGF1
RP5-1000K24.2	ENSG00000248503.2	700.68270	133.36870	2.39320	41.39310	38.98810	K562	RBM15
RP5-1000K24.2	ENSG00000248503.2	425.28730	102.09730	2.05840	14.72020	11.24060	K562	HNRNPA2B1
RP5-1000K24.2	ENSG00000248503.2	703.95070	138.03750	2.35030	10.58720	9.20360	K562	AKAP8L
RP5-1000K24.2	ENSG00000248503.2	29.53280	109.03110	-1.88430	8.33380	6.91210	K562	PUF60
RP5-1000K24.2	ENSG00000248503.2	19.80230	116.88180	-2.56130	7.75390	6.80880	K562	FXR1
RP5-1000K24.2	ENSG00000248503.2	33.41090	105.67750	-1.66130	8.17610	6.69470	K562	MAGOH
RP5-1000K24.2	ENSG00000248503.2	29.70780	101.86510	-1.77770	7.94850	6.67180	K562	TARDBP
RP5-1000K24.2	ENSG00000248503.2	468.18150	89.27600	2.39060	8.20200	6.17460	K562	PABPN1
RP5-1000K24.2	ENSG00000248503.2	32.69400	103.58670	-1.66370	7.52230	5.64110	K562	NELFE
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 43 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP5-1000K24.2 is not available on ENCORE database.

9 RBPs can affect the splicing of RP5-1000K24.2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP5-1000K24.2	ENSG00000248503.2	chrX	+	77178495	77178539	77166237	77166332	77218119	77220387	-0.16100	0.00000	0.00008	excluded	K562	AKAP8L
SE	RP5-1000K24.2	ENSG00000248503.2	chrX	+	77178495	77178539	77166237	77166332	77218119	77220387	-0.17000	0.00000	0.00000	excluded	K562	PUS1
SE	RP5-1000K24.2	ENSG00000248503.2	chrX	+	77178495	77178539	77166237	77166332	77218119	77220387	-0.15400	0.00000	0.00024	excluded	K562	RBM15
SE	RP5-1000K24.2	ENSG00000248503.2	chrX	+	77178495	77178539	77166237	77166332	77218119	77220387	-0.18400	0.00000	0.00000	excluded	K562	AGGF1
SE	RP5-1000K24.2	ENSG00000248503.2	chrX	+	77178495	77178539	77166237	77166332	77218119	77220387	0.37900	0.00006	0.00421	included	K562	FXR1
SE	RP5-1000K24.2	ENSG00000248503.2	chrX	+	77178495	77178549	77166237	77166332	77218119	77220387	-0.20300	0.00016	0.03500	excluded	K562	LARP4
SE	RP5-1000K24.2	ENSG00000248503.2	chrX	+	77178495	77178539	77166237	77166332	77218119	77220387	0.45300	0.00038	0.07409	included	K562	SAFB
SE	RP5-1000K24.2	ENSG00000248503.2	chrX	+	77178495	77178539	77166237	77166332	77218119	77220387	-0.13400	0.00065	0.02471	excluded	K562	UTP18
SE	RP5-1000K24.2	ENSG00000248503.2	chrX	+	77178495	77178539	77166237	77166332	77218119	77220387	0.20600	0.00230	0.04072	included	K562	SF3B4

Showing 1 to 9 of 9 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP5-1000K24.2

General Information

Functions

Localization

Domains (AlphaFold: RP5-1000K24.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP5-1000K24.2 is not avaliable on ENCORE database.

1 proteins are bound to RP5-1000K24.2 RNA:

eCLIP assay for RP5-1000K24.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP5-1000K24.2 is not available on ENCORE database.

43 RBPs can affect the gene expression of RP5-1000K24.2 :

The Knockdown/knockout RNA-Seq assay for RP5-1000K24.2 is not available on ENCORE database.

9 RBPs can affect the splicing of RP5-1000K24.2 :

The Knockdown/knockout RNA-Seq assay for RP5-1000K24.2 is not avaliable on ENCORE database.