ZCCHC14

General Information

Gene Name : ZCCHC14
Gene ID : ENSG00000140948.11
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ZCCHC14)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ZCCHC14	ENSG00000140948.11	0.05	0.02	0.04	ENCSR000AEF
HepG2	ZCCHC14	ENSG00000140948.11	15.71	16.07	15.89	ENCSR985KAT
K562	ZCCHC14	ENSG00000140948.11	4.31	3.94	4.12	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project	Note
ZCCHC14	Ribo-STAMP-293T	shRNA			BGRSLV10-35,BGRSLV10-36	BGRSLV10-1,BGRSLV10-2		NotSatisfied	ENCORE2

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ZCCHC14 is not avaliable on ENCORE database.

Proteins bound to RNA

ZCCHC14 RNA is bound by 36 proteins.

CanvasJS.com

eCLIP assay for ZCCHC14 is not avaliable on ENCORE database.

36 proteins are bound to ZCCHC14 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	87487214	87487308	-	intron-Distal	5.83019	29.37810	HepG2	SUGP2
chr16	87511333	87511463	-	intron-Distal	4.97821	26.95326	HepG2	RBFOX2
chr16	87511463	87511541	-	intron-Distal	4.82614	19.72123	HepG2	RBFOX2
chr16	87439876	87440013	-	3'-UTR,intron-Distal	5.64005	18.26174	HepG2	FUBP3
chr16	87446384	87446542	-	CDS,intron-Distal	4.38097	14.91579	HepG2	IGF2BP1
chr16	87454171	87454243	-	CDS,intron-Distal,intron-Proximal	4.14399	13.89730	HepG2	PRPF8
chr16	87486833	87486893	-	intron-Distal	5.79296	13.78580	HepG2	MATR3
chr16	87486827	87486900	-	intron-Distal	3.38798	13.57502	HepG2	SUGP2
chr16	87524912	87525060	-	intron-Distal	3.27770	13.45823	HepG2	DDX59
chr16	87521183	87521240	-	intron-Distal	5.73454	13.41470	HepG2	HNRNPM
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 123 entries

eCLIP assay for ZCCHC14 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ZCCHC14 is not available on ENCORE database.
105 RBPs can affect the levels of ZCCHC14.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ZCCHC14 is not available on ENCORE database.

105 RBPs can affect the gene expression of ZCCHC14 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ZCCHC14	ENSG00000140948.7	897.22970	2620.59490	-1.54630	30.86000	29.32460	HepG2	AKAP1
ZCCHC14	ENSG00000140948.7	1712.34330	2754.54740	-0.68580	26.59720	25.34220	HepG2	ZNF622
ZCCHC14	ENSG00000140948.7	3230.76600	2131.44640	0.59990	16.87330	15.56290	HepG2	RECQL
ZCCHC14	ENSG00000140948.7	597.44930	303.71930	0.97600	13.44090	12.20950	K562	FXR1
ZCCHC14	ENSG00000140948.7	2415.06710	1623.21680	0.57310	13.31870	11.81340	HepG2	PRPF4
ZCCHC14	ENSG00000140948.7	1249.33820	2171.65590	-0.79760	12.32830	10.95740	HepG2	HNRNPK
ZCCHC14	ENSG00000140948.7	1334.55500	1921.66720	-0.52600	11.84540	10.77500	HepG2	ACO1
ZCCHC14	ENSG00000140948.7	2449.32800	1434.57380	0.77170	11.97760	10.52410	HepG2	NSUN2
ZCCHC14	ENSG00000140948.7	2362.16340	1503.01600	0.65210	11.45520	10.07850	HepG2	IGF2BP1
ZCCHC14	ENSG00000140948.7	3190.95060	2288.44560	0.47950	10.70690	9.77120	HepG2	NELFE
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 115 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ZCCHC14 is not available on ENCORE database.

1 RBPs can affect the splicing of ZCCHC14 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	ZCCHC14	ENSG00000140948.7	chr16	-	87454212	87454322			87453388	87453483	87457415	87457487	-0.12600	0.00002	0.00073	excluded	HepG2	U2AF1

Showing 1 to 1 of 1 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ZCCHC14

General Information

Functions

Localization

Domains (AlphaFold: ZCCHC14)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ZCCHC14 is not avaliable on ENCORE database.

36 proteins are bound to ZCCHC14 RNA:

eCLIP assay for ZCCHC14 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ZCCHC14 is not available on ENCORE database.

105 RBPs can affect the gene expression of ZCCHC14 :

The Knockdown/knockout RNA-Seq assay for ZCCHC14 is not available on ENCORE database.

1 RBPs can affect the splicing of ZCCHC14 :

The Knockdown/knockout RNA-Seq assay for ZCCHC14 is not avaliable on ENCORE database.