WRNIP1

General Information

Gene Name       : WRNIP1
Gene ID             : ENSG00000124535.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: WRNIP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878WRNIP1ENSG00000124535.1511.2620.5215.89ENCSR000AEF
HepG2WRNIP1ENSG00000124535.1576.2162.4269.31ENCSR985KAT
K562WRNIP1ENSG00000124535.1537.6442.8040.22ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for WRNIP1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • WRNIP1 RNA is bound by 14 proteins.  







eCLIP assay for WRNIP1 is not avaliable on ENCORE database.





14 proteins are bound to WRNIP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr627859862786115+3'-UTR4.442705.84425HepG2CSTF2
chr627856842785738+3'-UTR4.742516.37221HepG2LARP4
chr627856562785729+3'-UTR4.8932114.07914K562PABPC4
chr627856442785744+3'-UTR4.994713.81167HepG2SUB1
chr627857652785863+3'-UTR3.759608.35956HepG2FUBP3
chr627858582785900+3'-UTR5.1520116.66765K562PABPC4
chr627858462785952+3'-UTR3.298056.66452K562PUM2
chr627858632785955+3'-UTR5.9080713.11442HepG2FUBP3
chr627658282765880+5'-UTR,CDS4.705107.63030HepG2DDX3X
chr627657152765795+5'-UTR3.887876.88189HepG2DDX3X
chr627691152769203+5'-UTR,CDS,intron-Proximal4.577074.13847K562AQR
chr627664542766504+5'-UTR,CDS3.204193.50786HepG2G3BP1
chr627844692784586+CDS,intron-Proximal4.443474.28193HepG2AQR
chr627658802765925+CDS3.669915.01580HepG2DDX3X
chr627689252768980+CDS4.042723.44423K562BUD13
chr627660022766065+CDS4.216468.97908HepG2DDX3X
chr627689242768954+CDS,intron-Proximal4.280963.36483HepG2G3BP1
chr627666752766698+CDS,intron-Proximal4.747594.13847K562AQR
chr627852402785316+CDS,intron-Proximal3.052594.18458HepG2G3BP1
chr627687552768838+intron-Distal,intron-Proximal3.021323.29251K562KHSRP
chr627682372768330+intron-Distal3.302773.35377HepG2QKI
chr627847012784777+intron-Distal,intron-Proximal3.378393.88924K562PRPF8
chr627705952770728+intron-Distal,intron-Proximal3.454419.75493K562AQR
chr627835492783635+intron-Proximal3.842513.25678HepG2SF3B4
chr627666982766719+intron-Proximal3.812114.49024K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for WRNIP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for WRNIP1 is not available on ENCORE database.

  • 84 RBPs can affect the levels of WRNIP1.  








The Knockdown/knockout RNA-Seq assay for WRNIP1 is not available on ENCORE database.





84 RBPs can affect the gene expression of WRNIP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
WRNIP1ENSG00000124535.111822.584902257.92170-0.309001.798201.35910HepG2AKAP1
WRNIP1ENSG00000124535.111091.912201729.91580-0.663809.275507.97200HepG2AKAP8L
WRNIP1ENSG00000124535.11824.297701081.92630-0.392402.618201.74180HepG2BCLAF1
WRNIP1ENSG00000124535.111491.142501841.88350-0.304802.594701.40500HepG2BUD13
WRNIP1ENSG00000124535.111271.755501691.94870-0.411904.766603.78870HepG2CALR
WRNIP1ENSG00000124535.111100.532401609.17580-0.548105.932104.95980HepG2CPSF6
WRNIP1ENSG00000124535.11951.329601465.15550-0.6230010.714308.77480HepG2YBX3
WRNIP1ENSG00000124535.111829.237801592.535200.199802.026201.30240HepG2DDX19B
WRNIP1ENSG00000124535.11821.150601224.51320-0.576504.045403.12950HepG2DDX55
WRNIP1ENSG00000124535.111099.917101387.55290-0.335102.685201.71610HepG2DHX30
WRNIP1ENSG00000124535.111287.473401647.48260-0.355703.843403.07040HepG2DKC1
WRNIP1ENSG00000124535.111098.520701438.59910-0.389104.792203.88880HepG2DNAJC21
WRNIP1ENSG00000124535.111142.662201426.00300-0.319604.577103.77470HepG2DNAJC2
WRNIP1ENSG00000124535.111162.957401521.93700-0.388102.952502.00280HepG2EEF2
WRNIP1ENSG00000124535.11961.640101268.71590-0.399803.053901.89270HepG2EFTUD2
WRNIP1ENSG00000124535.111353.504101786.14630-0.400203.017902.39950HepG2EIF2S1
WRNIP1ENSG00000124535.11893.565801184.45510-0.406603.952202.68690HepG2EIF3G
WRNIP1ENSG00000124535.111314.340401973.91930-0.586705.334004.44670HepG2EIF4A3
WRNIP1ENSG00000124535.11992.403902541.14840-1.3565063.0880060.93000HepG2ETF1
WRNIP1ENSG00000124535.111888.859702482.22620-0.394102.753501.98590HepG2FIP1L1
WRNIP1ENSG00000124535.11964.975701397.04930-0.533803.394302.15650HepG2FUS
WRNIP1ENSG00000124535.111376.199901991.54840-0.533205.188304.26090HepG2FXR1
WRNIP1ENSG00000124535.111304.061001847.48130-0.502504.259003.44190HepG2G3BP1
WRNIP1ENSG00000124535.111404.641201961.30150-0.481604.481203.33520HepG2G3BP2
WRNIP1ENSG00000124535.111181.399301824.01160-0.626606.310605.37050HepG2GPKOW
WRNIP1ENSG00000124535.11845.566701452.38250-0.7804011.3709010.20180HepG2HNRNPA1
WRNIP1ENSG00000124535.111457.061701824.25180-0.324204.215703.10200HepG2HNRNPA2B1
WRNIP1ENSG00000124535.111269.156901615.54260-0.348102.879702.17380HepG2HNRNPC
WRNIP1ENSG00000124535.111026.895901740.69820-0.761409.968408.85720HepG2HNRNPLL
WRNIP1ENSG00000124535.111363.692201877.93440-0.461603.975903.18060HepG2IGF2BP2
WRNIP1ENSG00000124535.111090.049101762.32000-0.693102.308101.41720HepG2IGF2BP3
WRNIP1ENSG00000124535.111304.683401639.30420-0.329405.696104.67720HepG2ILF2
WRNIP1ENSG00000124535.111314.517201888.86240-0.523003.710402.53000HepG2KHSRP
WRNIP1ENSG00000124535.112398.371003200.40060-0.416202.831001.99230HepG2LARP4
WRNIP1ENSG00000124535.111354.025101992.24340-0.557105.476504.56230HepG2MAGOH
WRNIP1ENSG00000124535.111390.750802009.11680-0.530706.778405.56690HepG2MSI2
WRNIP1ENSG00000124535.111508.922302050.60090-0.442503.549302.83600HepG2NCBP2
WRNIP1ENSG00000124535.111370.579401996.76430-0.542906.450504.10420HepG2NUP35
WRNIP1ENSG00000124535.111007.193601826.22630-0.8585011.404109.96600HepG2PABPC4
WRNIP1ENSG00000124535.111595.191601862.15250-0.223202.336701.76900HepG2PCBP1
WRNIP1ENSG00000124535.11668.45510944.13030-0.498203.859002.92470HepG2PRPF8
WRNIP1ENSG00000124535.111241.227001894.86680-0.6103012.9112011.90270HepG2PTBP1
WRNIP1ENSG00000124535.111459.891101878.91700-0.364003.507202.84680HepG2PUF60
WRNIP1ENSG00000124535.111702.782801993.09480-0.227101.908601.34560HepG2PUM2
WRNIP1ENSG00000124535.111278.424501754.00270-0.456305.355904.54970HepG2PUS1
WRNIP1ENSG00000124535.111444.834902052.06610-0.506207.753506.78860HepG2QKI
WRNIP1ENSG00000124535.112057.212002661.82140-0.371704.495203.43390HepG2RBM15
WRNIP1ENSG00000124535.111591.213002123.90940-0.416606.387705.67830HepG2RBM22
WRNIP1ENSG00000124535.111259.809701862.42780-0.564007.691506.61590HepG2RBM25
WRNIP1ENSG00000124535.111114.181001470.10720-0.399903.305502.21570HepG2RBM27
WRNIP1ENSG00000124535.111350.487602108.75750-0.6429014.7021013.64040HepG2NELFE
WRNIP1ENSG00000124535.111501.421101964.10690-0.387506.004205.14360HepG2RECQL
WRNIP1ENSG00000124535.111214.161501848.44300-0.606407.471606.43120HepG2RPLP0
WRNIP1ENSG00000124535.111080.587901355.81830-0.327302.318001.58220HepG2RPS2
WRNIP1ENSG00000124535.111382.080201972.69880-0.513309.838208.82400HepG2SF3B4
WRNIP1ENSG00000124535.11813.828501917.03120-1.2361014.0101012.27040HepG2SNRNP70
WRNIP1ENSG00000124535.111533.329502398.84140-0.6457019.4802018.46590HepG2SRFBP1
WRNIP1ENSG00000124535.111409.080101685.93940-0.258802.667901.98450HepG2SRSF7
WRNIP1ENSG00000124535.111838.293202082.69930-0.180101.934001.48530HepG2SSB
WRNIP1ENSG00000124535.11852.786601658.11360-0.9593010.136607.96760HepG2STAU1
WRNIP1ENSG00000124535.11976.949001218.84400-0.319202.033301.44070HepG2SUPV3L1
WRNIP1ENSG00000124535.11833.573701850.92590-1.1509035.2619033.54640HepG2TAF15
WRNIP1ENSG00000124535.11811.982201696.94560-1.0634019.6687018.05850HepG2TARDBP
WRNIP1ENSG00000124535.111187.875701700.62610-0.517706.768505.46500HepG2TIA1
WRNIP1ENSG00000124535.111035.228701559.28680-0.590908.925908.12000HepG2TIAL1
WRNIP1ENSG00000124535.11495.482601281.53390-1.3710016.6442013.48150HepG2TRA2A
WRNIP1ENSG00000124535.112488.822001976.145800.332705.795704.98130HepG2UTP3
WRNIP1ENSG00000124535.11840.902201199.82250-0.512803.643502.82070HepG2XRN2
WRNIP1ENSG00000124535.111416.532301623.22420-0.196502.083001.48730HepG2ZC3H8
WRNIP1ENSG00000124535.111057.757102251.13600-1.0896053.7834052.15960HepG2ZNF622
WRNIP1ENSG00000124535.111474.626901096.167800.427806.281405.47930K562AGGF1
WRNIP1ENSG00000124535.111905.256201590.709100.260202.781601.67400K562CPEB4
WRNIP1ENSG00000124535.112095.710301646.253800.348204.938404.10350K562DDX47
WRNIP1ENSG00000124535.11950.15530708.657800.423004.482003.73710K562FXR1
WRNIP1ENSG00000124535.11348.14940487.44820-0.485502.406601.75380K562G3BP2
WRNIP1ENSG00000124535.111420.744101722.59280-0.277902.074601.41330K562GRSF1
WRNIP1ENSG00000124535.11808.833101058.59960-0.388203.212002.05330K562HNRNPA1
WRNIP1ENSG00000124535.111006.22420782.789400.362202.897601.72910K562HNRNPF
WRNIP1ENSG00000124535.111410.913101172.315700.267202.387501.55740K562HNRNPU
WRNIP1ENSG00000124535.111506.097101210.484100.315102.733201.91300K562KIF1C
WRNIP1ENSG00000124535.111677.560701356.046100.306902.891101.95700K562MBNL1
WRNIP1ENSG00000124535.111134.446701363.26910-0.265102.758301.95060K562MTPAP
WRNIP1ENSG00000124535.11892.55880737.173100.275801.912401.34200K562PTBP1
WRNIP1ENSG00000124535.112092.341201131.198200.8872015.0782013.85180K562PUS1
WRNIP1ENSG00000124535.111433.752401102.159400.379404.276403.55480K562RBM15
WRNIP1ENSG00000124535.111224.36370722.672100.7605011.4876010.05950K562SRSF1
WRNIP1ENSG00000124535.111003.672201508.78450-0.588105.792903.90740K562STAU1
WRNIP1ENSG00000124535.111226.36280907.333400.434604.613203.54620K562SYNCRIP
WRNIP1ENSG00000124535.11536.71430692.30290-0.367202.442101.42970K562TRA2A
WRNIP1ENSG00000124535.11356.45450487.73090-0.452403.240602.37280K562U2AF2
WRNIP1ENSG00000124535.11761.618501606.05190-1.0764035.5950033.36050K562UPF1
WRNIP1ENSG00000124535.111642.369801429.082900.200602.163701.40810K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for WRNIP1 is not available on ENCORE database.





7 RBPs can affect the splicing of WRNIP1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEWRNIP1ENSG00000124535.11chr6+277322127733752770428277059527794962779726-0.159000.000000.00015excludedK562SRSF1
SEWRNIP1ENSG00000124535.11chr6+277035327705952765647276667827794962779726-0.058000.001580.01795excludedK562AQR
SEWRNIP1ENSG00000124535.11chr6+2773221277327927703532770595277949627797260.055000.000850.09517includedK562DROSHA
SEWRNIP1ENSG00000124535.11chr6+2773221277337527704282770595277949627797260.066000.000250.02511includedK562HNRNPUL1
SEWRNIP1ENSG00000124535.11chr6+2773221277337527703532770595277949627797260.064000.000430.04978includedHepG2TAF15
SEWRNIP1ENSG00000124535.11chr6+2773171277327927704282770595277949627797260.338000.005420.07736includedK562U2AF2
SEWRNIP1ENSG00000124535.11chr6+2773221277337527703532770595277949627797260.069000.000130.03273includedK562NPM1
A3SSWRNIP1ENSG00000124535.11chr6+2773171277327927732212773279277035327705950.267000.019780.09448longerK562AQR
MXEWRNIP1ENSG00000124535.11chr6+27732212773375277915927793672770353277059527794962779726-0.379000.000840.007842includedK562AQR
MXEWRNIP1ENSG00000124535.11chr6+27732212773375277917627793672770353277059527794962779726-0.329000.001420.012382includedK562AQR
MXEWRNIP1ENSG00000124535.11chr6+27732212773375277931727793672770353277059527794962779726-0.340000.016860.096042includedK562AQR
MXEWRNIP1ENSG00000124535.11chr6+27732212773350277917627793672770428277059527794962779726-0.438000.000580.005632includedK562AQR
MXEWRNIP1ENSG00000124535.11chr6+27732212773350277915927793672770428277059527794962779726-0.488000.000240.002572includedK562AQR
MXEWRNIP1ENSG00000124535.11chr6+27732212773350277931727793672770428277059527794962779726-0.417000.009450.060512includedK562AQR
MXEWRNIP1ENSG00000124535.11chr6+27732212773279277915927793672770353277059527794962779726-0.442000.000550.005372includedK562AQR
MXEWRNIP1ENSG00000124535.11chr6+27732212773279277917627793672770353277059527794962779726-0.394000.002650.021122includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for WRNIP1 is not avaliable on ENCORE database.