WASF3

General Information

Gene Name : WASF3
Gene ID : ENSG00000132970.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: WASF3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	WASF3	ENSG00000132970.12	0.00	0.00	0.00	ENCSR000AEF
HepG2	WASF3	ENSG00000132970.12	8.97	13.71	11.34	ENCSR985KAT
K562	WASF3	ENSG00000132970.12	0.06	0.08	0.07	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for WASF3 is not avaliable on ENCORE database.

Proteins bound to RNA

WASF3 RNA is bound by 6 proteins.

CanvasJS.com

eCLIP assay for WASF3 is not avaliable on ENCORE database.

6 proteins are bound to WASF3 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr13	27261552	27261647	+	3'-UTR	5.59053	12.06635	HepG2	LIN28B
chr13	27253176	27253260	+	intron-Distal	5.51818	9.83211	HepG2	PCBP2
chr13	27253106	27253176	+	intron-Distal	3.85615	8.47057	HepG2	PCBP2
chr13	27131862	27131959	+	5'-UTR,intron-Proximal	3.89454	7.12467	HepG2	DDX3X
chr13	27260822	27260882	+	3'-UTR	4.80731	6.37354	HepG2	LIN28B
chr13	27230637	27230739	+	intron-Distal	4.61352	5.85495	HepG2	QKI
chr13	27253388	27253494	+	intron-Distal	5.07952	5.77028	HepG2	PCBP2
chr13	27152784	27152861	+	intron-Distal	4.57952	5.41525	HepG2	PCBP2
chr13	27253420	27253497	+	intron-Distal	4.07332	4.07750	HepG2	HNRNPK
chr13	27250643	27250715	+	CDS,intron-Distal,intron-Proximal	3.49283	3.80334	HepG2	U2AF2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 10 entries

eCLIP assay for WASF3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for WASF3 is not available on ENCORE database.
73 RBPs can affect the levels of WASF3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for WASF3 is not available on ENCORE database.

73 RBPs can affect the gene expression of WASF3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
WASF3	ENSG00000132970.8	649.37180	1191.69840	-0.87590	20.31360	19.28220	HepG2	SRFBP1
WASF3	ENSG00000132970.8	311.07470	646.04340	-1.05440	19.11860	17.63360	HepG2	ZC3H8
WASF3	ENSG00000132970.8	389.87470	790.34290	-1.01950	16.49660	15.45940	HepG2	TIAL1
WASF3	ENSG00000132970.8	498.70390	997.52340	-1.00020	15.77510	14.50800	HepG2	PUF60
WASF3	ENSG00000132970.8	377.41610	827.65060	-1.13290	12.68330	11.47490	HepG2	DDX6
WASF3	ENSG00000132970.8	393.78130	680.30570	-0.78880	12.04800	10.23180	HepG2	HDGF
WASF3	ENSG00000132970.8	359.49360	738.37900	-1.03840	11.64020	9.53210	HepG2	GNB2L1
WASF3	ENSG00000132970.8	516.67210	1005.73600	-0.96090	9.97580	9.03200	HepG2	AKAP1
WASF3	ENSG00000132970.8	447.64860	812.75420	-0.86050	10.17400	9.00570	HepG2	RPLP0
WASF3	ENSG00000132970.8	466.92670	892.39850	-0.93450	9.51440	8.40310	HepG2	MATR3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 74 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for WASF3 is not available on ENCORE database.

9 RBPs can affect the splicing of WASF3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	WASF3	ENSG00000132970.8	chr13	+	27250685	27250727			27246008	27246126	27254171	27254338	0.33200	0.00000	0.00001	included	HepG2	U2AF2
MXE	WASF3	ENSG00000132970.8	chr13	+	27250685	27250861	27254171	27254338	27246008	27246126	27255190	27255457	-0.38800	0.00000	0.00000	2included	HepG2	SRSF1
MXE	WASF3	ENSG00000132970.8	chr13	+	27250685	27250861	27254171	27254338	27246008	27246126	27255190	27255457	0.16900	0.00001	0.00385	1included	HepG2	HNRNPM
MXE	WASF3	ENSG00000132970.8	chr13	+	27250685	27250861	27254171	27254338	27246008	27246126	27255190	27255457	0.12600	0.00004	0.00243	1included	HepG2	NCBP2
MXE	WASF3	ENSG00000132970.8	chr13	+	27250685	27250861	27254171	27254338	27246008	27246126	27255190	27255457	-0.17500	0.00008	0.00439	2included	HepG2	PCBP1
MXE	WASF3	ENSG00000132970.8	chr13	+	27250685	27250861	27254171	27254338	27246008	27246126	27255190	27255457	-0.15000	0.00017	0.01650	2included	HepG2	LARP4
MXE	WASF3	ENSG00000132970.8	chr13	+	27250685	27250861	27254171	27254338	27246008	27246126	27255190	27255457	0.08900	0.00125	0.04298	1included	HepG2	SF3A3
MXE	WASF3	ENSG00000132970.8	chr13	+	27250685	27250861	27254171	27254338	27246008	27246126	27255190	27255457	-0.21800	0.00170	0.04948	2included	HepG2	HNRNPU
MXE	WASF3	ENSG00000132970.8	chr13	+	27250685	27250861	27254171	27254338	27246008	27246126	27255190	27255457	0.13600	0.00416	0.06425	1included	HepG2	FTO
MXE	WASF3	ENSG00000132970.8	chr13	+	27250630	27250861	27254171	27254338	27246008	27246126	27255190	27255457	0.20100	0.00529	0.03185	1included	HepG2	U2AF2

Showing 1 to 10 of 11 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

WASF3

General Information

Functions

Localization

Domains (AlphaFold: WASF3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for WASF3 is not avaliable on ENCORE database.

6 proteins are bound to WASF3 RNA:

eCLIP assay for WASF3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for WASF3 is not available on ENCORE database.

73 RBPs can affect the gene expression of WASF3 :

The Knockdown/knockout RNA-Seq assay for WASF3 is not available on ENCORE database.

9 RBPs can affect the splicing of WASF3 :

The Knockdown/knockout RNA-Seq assay for WASF3 is not avaliable on ENCORE database.