STX16

General Information

Gene Name : STX16
Gene ID : ENSG00000124222.22
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: STX16)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	STX16	ENSG00000124222.22	42.19	37.02	39.61	ENCSR000AEF
HepG2	STX16	ENSG00000124222.22	72.79	71.63	72.21	ENCSR985KAT
K562	STX16	ENSG00000124222.22	27.34	25.83	26.59	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for STX16 is not avaliable on ENCORE database.

Proteins bound to RNA

STX16 RNA is bound by 32 proteins.

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eCLIP assay for STX16 is not avaliable on ENCORE database.

32 proteins are bound to STX16 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr20	57226454	57226497	+	5'-UTR,intron-Proximal	4.44244	400.00000	HepG2	PRPF8
chr20	57226449	57226454	+	5'-UTR	4.53145	76.06903	HepG2	PRPF8
chr20	57226453	57226540	+	5'-UTR,intron-Proximal	5.83312	72.15048	HepG2	AQR
chr20	57226455	57226494	+	5'-UTR,intron-Proximal	5.61499	57.42524	K562	AQR
chr20	57226337	57226403	+	5'-UTR	4.06185	51.82408	HepG2	NCBP2
chr20	57227096	57227132	+	5'-UTR,CDS,intron-Proximal	4.89263	46.71195	HepG2	PRPF8
chr20	57226495	57226563	+	5'-UTR,intron-Distal,intron-Proximal	4.87230	42.82766	K562	AQR
chr20	57227110	57227174	+	5'-UTR,CDS,intron-Proximal	6.27117	37.60015	HepG2	AQR
chr20	57226450	57226453	+	5'-UTR	5.13135	36.90361	HepG2	AQR
chr20	57243100	57243185	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.50319	36.78479	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 122 entries

eCLIP assay for STX16 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for STX16 is not available on ENCORE database.
62 RBPs can affect the levels of STX16.

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The Knockdown/knockout RNA-Seq assay for STX16 is not available on ENCORE database.

62 RBPs can affect the gene expression of STX16 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
STX16	ENSG00000124222.17	9516.99620	4184.17790	1.18550	42.70960	40.35590	HepG2	RBM25
STX16	ENSG00000124222.17	2765.85490	4865.83610	-0.81500	36.73590	34.92170	HepG2	UTP3
STX16	ENSG00000124222.17	2653.99490	5574.14380	-1.07060	30.72280	29.02430	HepG2	PUF60
STX16	ENSG00000124222.17	10849.37630	7077.87950	0.61610	29.29860	28.11660	HepG2	SRFBP1
STX16	ENSG00000124222.17	5863.26940	3763.60650	0.63950	25.39200	24.03470	HepG2	SRSF9
STX16	ENSG00000124222.17	11261.16570	7497.57230	0.58680	22.18950	20.76580	HepG2	ETF1
STX16	ENSG00000124222.17	3348.27240	4722.39180	-0.49610	17.50220	16.14280	HepG2	CKAP4
STX16	ENSG00000124222.17	6101.36590	4257.03150	0.51920	13.93100	12.88770	HepG2	PTBP1
STX16	ENSG00000124222.17	2724.13160	3757.27340	-0.46390	11.61400	10.44270	HepG2	HNRNPU
STX16	ENSG00000124222.17	1352.55500	2028.94780	-0.58500	11.50370	10.35660	K562	FXR1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 71 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for STX16 is not available on ENCORE database.

43 RBPs can affect the splicing of STX16 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	STX16	ENSG00000124222.17	chr20	+	57234678	57234690	57226921	57227143	57242545	57242653	0.20700	0.00055	included	K562	MATR3
SE	STX16	ENSG00000124222.17	chr20	+	57234678	57234690	57226327	57227143	57242545	57242653	0.49100	0.00000	included	HepG2	U2AF1
SE	STX16	ENSG00000124222.17	chr20	+	57244346	57244509	57243042	57243183	57245567	57245659	-0.24200	0.00001	excluded	HepG2	HNRNPK
SE	STX16	ENSG00000124222.17	chr20	+	57234678	57234690	57226921	57227143	57242545	57242653	0.39700	0.00000	included	HepG2	U2AF2
SE	STX16	ENSG00000124222.17	chr20	+	57244346	57244509	57243042	57243183	57245567	57245659	-0.32400	0.00000	excluded	K562	AQR
SE	STX16	ENSG00000124222.17	chr20	+	57244346	57244509	57243042	57243183	57245567	57245659	-0.31300	0.00072	excluded	K562	SUPV3L1
SE	STX16	ENSG00000124222.17	chr20	+	57234678	57234690	57227128	57227143	57242545	57242653	0.36600	0.00000	included	HepG2	SFPQ
SE	STX16	ENSG00000124222.17	chr20	+	57234678	57234690	57227128	57227143	57242545	57242653	0.24000	0.00005	included	HepG2	PTBP1
SE	STX16	ENSG00000124222.17	chr20	+	57244346	57244509	57243042	57243183	57245567	57245659	-0.39100	0.00001	excluded	K562	EFTUD2
SE	STX16	ENSG00000124222.17	chr20	+	57234678	57234690	57226921	57227143	57242545	57242653	0.34300	0.00000	included	K562	U2AF1

Showing 1 to 10 of 80 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

STX16

General Information

Functions

Localization

Domains (AlphaFold: STX16)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for STX16 is not avaliable on ENCORE database.

32 proteins are bound to STX16 RNA:

eCLIP assay for STX16 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for STX16 is not available on ENCORE database.

62 RBPs can affect the gene expression of STX16 :

The Knockdown/knockout RNA-Seq assay for STX16 is not available on ENCORE database.

43 RBPs can affect the splicing of STX16 :

The Knockdown/knockout RNA-Seq assay for STX16 is not avaliable on ENCORE database.