ST7

General Information

Gene Name : ST7
Gene ID : ENSG00000004866.20
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ST7)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ST7	ENSG00000004866.20	57.25	51.98	54.61	ENCSR000AEF
HepG2	ST7	ENSG00000004866.20	11.78	17.19	14.48	ENCSR985KAT
K562	ST7	ENSG00000004866.20	30.14	37.86	34.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ST7 is not avaliable on ENCORE database.

Proteins bound to RNA

ST7 RNA is bound by 27 proteins.

CanvasJS.com

eCLIP assay for ST7 is not avaliable on ENCORE database.

27 proteins are bound to ST7 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	116601618	116601696	+	intron-Distal	6.51499	20.34113	K562	EXOSC5
chr7	116608387	116608486	+	3'-UTR,CDS,intron-Distal,intron-Proximal	6.05536	19.38064	HepG2	PCBP2
chr7	116655143	116655281	+	intron-Distal,intron-Proximal	4.00069	16.23757	K562	KHSRP
chr7	116660631	116660686	+	5'-UTR,CDS,intron-Distal,intron-Proximal	5.12463	14.95069	K562	U2AF2
chr7	116663852	116663915	+	intron-Distal	5.59277	13.64051	K562	TARDBP
chr7	116594954	116595018	+	intron-Distal,intron-Proximal	6.18110	13.28301	HepG2	QKI
chr7	116594938	116595053	+	5'-UTR,intron-Distal,intron-Proximal	4.34475	12.98733	K562	QKI
chr7	116593452	116593530	+	5'-UTR	5.29568	11.35209	HepG2	DDX3X
chr7	116681108	116681188	+	intron-Distal	3.93648	10.93207	K562	HNRNPM
chr7	116619655	116619724	+	intron-Distal	5.11352	10.47376	HepG2	QKI
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 88 entries

eCLIP assay for ST7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ST7 is not available on ENCORE database.
81 RBPs can affect the levels of ST7.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ST7 is not available on ENCORE database.

81 RBPs can affect the gene expression of ST7 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ST7	ENSG00000004866.14	2436.20570	1204.84810	1.01570	19.85840	18.43070	K562	PUS1
ST7	ENSG00000004866.14	832.42230	476.03110	0.80620	14.35680	13.37180	HepG2	SSB
ST7	ENSG00000004866.14	1029.06760	560.02690	0.87770	14.97880	13.08800	K562	U2AF2
ST7	ENSG00000004866.14	684.66580	380.98860	0.84560	13.72720	12.53420	HepG2	PUS1
ST7	ENSG00000004866.14	1908.40660	1196.79960	0.67310	12.49900	11.22150	K562	DDX47
ST7	ENSG00000004866.14	861.94250	517.40810	0.73620	11.75260	10.65360	HepG2	UTP3
ST7	ENSG00000004866.14	2032.15440	1182.16240	0.78150	11.06980	9.28000	K562	BOP1
ST7	ENSG00000004866.14	880.50690	488.13650	0.85090	10.03440	8.82260	HepG2	U2AF1
ST7	ENSG00000004866.14	870.73740	589.40720	0.56290	8.88930	8.05130	HepG2	ZNF622
ST7	ENSG00000004866.14	959.16440	548.24930	0.80680	9.11820	7.75560	K562	PRPF8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 94 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ST7 is not available on ENCORE database.

23 RBPs can affect the splicing of ST7 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	ST7	ENSG00000004866.14	chr7	+	116774177	116774246	116771938	116772014	116776134	116776289	0.47800	0.00070	included	HepG2	RBM22
SE	ST7	ENSG00000004866.14	chr7	+	116774177	116774246	116771938	116772014	116776134	116776289	0.46800	0.00001	included	K562	MATR3
SE	ST7	ENSG00000004866.14	chr7	+	116774177	116774246	116771938	116772014	116776134	116776289	-0.11100	0.00039	excluded	K562	AKAP8L
SE	ST7	ENSG00000004866.14	chr7	+	116774177	116774246	116771938	116772014	116776134	116776289	0.18400	0.00001	included	HepG2	U2AF2
SE	ST7	ENSG00000004866.14	chr7	+	116774177	116774246	116771938	116772014	116776134	116776289	-0.11500	0.00000	excluded	K562	PUS1
SE	ST7	ENSG00000004866.14	chr7	+	116774177	116774246	116771938	116772014	116776134	116776289	0.61400	0.00000	included	HepG2	MATR3
SE	ST7	ENSG00000004866.14	chr7	+	116774177	116774246	116771938	116772014	116776134	116776289	0.52500	0.00000	included	HepG2	TIAL1
SE	ST7	ENSG00000004866.14	chr7	+	116774177	116774246	116771938	116772014	116776134	116776289	-0.12000	0.00029	excluded	K562	UTP18
SE	ST7	ENSG00000004866.14	chr7	+	116774177	116774246	116771938	116772014	116776134	116776289	-0.30600	0.00000	excluded	K562	HNRNPU
SE	ST7	ENSG00000004866.14	chr7	+	116774177	116774246	116771938	116772014	116776134	116776289	-0.12300	0.00002	excluded	K562	RBM15

Showing 1 to 10 of 39 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ST7

General Information

Functions

Localization

Domains (AlphaFold: ST7)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ST7 is not avaliable on ENCORE database.

27 proteins are bound to ST7 RNA:

eCLIP assay for ST7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ST7 is not available on ENCORE database.

81 RBPs can affect the gene expression of ST7 :

The Knockdown/knockout RNA-Seq assay for ST7 is not available on ENCORE database.

23 RBPs can affect the splicing of ST7 :

The Knockdown/knockout RNA-Seq assay for ST7 is not avaliable on ENCORE database.