ST6GALNAC1

General Information

Gene Name : ST6GALNAC1
Gene ID : ENSG00000070526.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ST6GALNAC1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ST6GALNAC1	ENSG00000070526.14	0.00	0.00	0.00	ENCSR000AEF
HepG2	ST6GALNAC1	ENSG00000070526.14	0.00	0.00	0.00	ENCSR985KAT
K562	ST6GALNAC1	ENSG00000070526.14	45.07	46.00	45.53	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ST6GALNAC1 is not avaliable on ENCORE database.

Proteins bound to RNA

ST6GALNAC1 RNA is bound by 6 proteins.

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eCLIP assay for ST6GALNAC1 is not avaliable on ENCORE database.

6 proteins are bound to ST6GALNAC1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	74625032	74625087	-	intron-Distal,intron-Proximal	4.12625	11.09862	K562	RBM15
chr17	74624858	74624918	-	intron-Distal	5.22285	9.33028	K562	RBM15
chr17	74622688	74622737	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.36059	8.29266	K562	AQR
chr17	74625469	74625520	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.28964	6.73886	K562	ZNF622
chr17	74621745	74621808	-	intron-Distal,intron-Proximal	4.80119	6.64445	K562	BUD13
chr17	74623451	74623517	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.15192	6.35796	K562	AQR
chr17	74621850	74621901	-	intron-Distal,intron-Proximal	4.20412	5.97994	K562	AQR
chr17	74623226	74623321	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.52851	5.26861	K562	DDX24
chr17	74621595	74621639	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.99211	4.98250	K562	AQR
chr17	74624704	74624756	-	intron-Distal	3.48014	4.24159	K562	RBM15
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 11 entries

eCLIP assay for ST6GALNAC1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ST6GALNAC1 is not available on ENCORE database.
61 RBPs can affect the levels of ST6GALNAC1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ST6GALNAC1 is not available on ENCORE database.

61 RBPs can affect the gene expression of ST6GALNAC1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ST6GALNAC1	ENSG00000070526.10	1353.23880	3207.53630	-1.24500	29.04310	27.26700	K562	PUS1
ST6GALNAC1	ENSG00000070526.10	1701.52350	3125.27800	-0.87720	25.05360	23.19270	K562	RBM15
ST6GALNAC1	ENSG00000070526.10	1898.48240	3108.28940	-0.71130	21.61840	20.14040	K562	AGGF1
ST6GALNAC1	ENSG00000070526.10	1659.83990	3234.31890	-0.96240	20.95670	18.82110	K562	AKAP8L
ST6GALNAC1	ENSG00000070526.10	343.95370	801.27860	-1.22010	15.27630	13.33250	K562	RPS19
ST6GALNAC1	ENSG00000070526.10	2372.55250	3480.34050	-0.55280	12.24260	10.13060	K562	DKC1
ST6GALNAC1	ENSG00000070526.10	2303.69920	3393.58470	-0.55890	11.55970	9.50680	K562	ATP5C1
ST6GALNAC1	ENSG00000070526.10	2463.43000	3714.56690	-0.59250	11.25420	8.89090	K562	CCDC124
ST6GALNAC1	ENSG00000070526.10	2115.47960	3432.41050	-0.69820	10.70080	8.77270	K562	KIF1C
ST6GALNAC1	ENSG00000070526.10	835.08810	1453.29000	-0.79930	9.57700	8.59050	K562	AQR
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 61 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ST6GALNAC1 is not available on ENCORE database.

11 RBPs can affect the splicing of ST6GALNAC1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ST6GALNAC1	ENSG00000070526.10	chr17	-	74633681	74633818			74625093	74625793	74639589	74639868	0.21200	0.00000	0.00001	included	K562	PUS1
SE	ST6GALNAC1	ENSG00000070526.10	chr17	-	74622370	74622474			74622087	74622177	74622732	74622871	-0.38200	0.00000	0.00050	excluded	K562	EFTUD2
SE	ST6GALNAC1	ENSG00000070526.10	chr17	-	74633681	74633818			74625093	74625793	74639589	74639868	0.66400	0.00000	0.00000	included	K562	HNRNPC
SE	ST6GALNAC1	ENSG00000070526.10	chr17	-	74622370	74622474			74622087	74622177	74622732	74622871	-0.57900	0.00000	0.00000	excluded	K562	HNRNPC
MXE	ST6GALNAC1	ENSG00000070526.10	chr17	-	74622370	74622474	74622732	74622871	74622087	74622177	74623148	74623320	0.25400	0.00000	0.00022	1included	K562	EFTUD2
MXE	ST6GALNAC1	ENSG00000070526.10	chr17	-	74622370	74622474	74622732	74622871	74622087	74622177	74623148	74623320	0.41500	0.00000	0.00000	1included	K562	HNRNPC
SE	ST6GALNAC1	ENSG00000070526.10	chr17	-	74622370	74622474			74622087	74622177	74622732	74622871	-0.30000	0.00001	0.00654	excluded	K562	PCBP1
SE	ST6GALNAC1	ENSG00000070526.10	chr17	-	74622370	74622474			74622087	74622177	74622732	74622871	-0.23100	0.00009	0.00163	excluded	K562	AQR
MXE	ST6GALNAC1	ENSG00000070526.10	chr17	-	74622370	74622474	74622732	74622871	74622087	74622177	74623148	74623320	0.18000	0.00015	0.06809	1included	K562	CSTF2T
SE	ST6GALNAC1	ENSG00000070526.10	chr17	-	74633681	74633818			74625093	74625793	74639589	74639868	0.20300	0.00023	0.03970	included	K562	MATR3

Showing 1 to 10 of 17 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ST6GALNAC1

General Information

Functions

Localization

Domains (AlphaFold: ST6GALNAC1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ST6GALNAC1 is not avaliable on ENCORE database.

6 proteins are bound to ST6GALNAC1 RNA:

eCLIP assay for ST6GALNAC1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ST6GALNAC1 is not available on ENCORE database.

61 RBPs can affect the gene expression of ST6GALNAC1 :

The Knockdown/knockout RNA-Seq assay for ST6GALNAC1 is not available on ENCORE database.

11 RBPs can affect the splicing of ST6GALNAC1 :

The Knockdown/knockout RNA-Seq assay for ST6GALNAC1 is not avaliable on ENCORE database.