RP11-274B21.1

General Information

Gene Name : RP11-274B21.1
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-274B21.1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-274B21.1 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-274B21.1 RNA is bound by 21 proteins.

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eCLIP assay for RP11-274B21.1 is not avaliable on ENCORE database.

21 proteins are bound to RP11-274B21.1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	128187290	128187429	+	intron-Distal	5.71160	28.73560	K562	QKI
chr7	128233272	128233359	+	intron-Distal	5.92603	14.82580	K562	TARDBP
chr7	128220022	128220088	+	intron-Proximal	3.84438	13.51777	K562	AQR
chr7	128183459	128183567	+	intron-Distal	4.15014	12.96831	K562	QKI
chr7	128229781	128229884	+	intron-Distal	5.42297	12.87275	K562	KHSRP
chr7	128232042	128232110	+	intron-Proximal	4.28800	11.50355	HepG2	PRPF8
chr7	128218022	128218040	+	intron-Distal	3.96262	11.16978	K562	DDX24
chr7	128171837	128171927	+	intron-Proximal	3.63908	10.64371	HepG2	EFTUD2
chr7	128228517	128228615	+	intron-Distal	3.52863	10.61601	K562	KHSRP
chr7	128183465	128183563	+	intron-Distal	5.27190	10.04496	HepG2	QKI
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 60 entries

eCLIP assay for RP11-274B21.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-274B21.1 is not available on ENCORE database.
66 RBPs can affect the levels of RP11-274B21.1.

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The Knockdown/knockout RNA-Seq assay for RP11-274B21.1 is not available on ENCORE database.

66 RBPs can affect the gene expression of RP11-274B21.1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-274B21.1	ENSG00000242588.2	369.72990	136.78620	1.43440	13.37650	11.97800	HepG2	MAGOH
RP11-274B21.1	ENSG00000242588.2	852.70000	1409.17600	-0.72470	13.71640	11.44600	K562	DKC1
RP11-274B21.1	ENSG00000242588.2	331.44840	122.61930	1.43450	12.19910	11.01050	HepG2	EIF2S1
RP11-274B21.1	ENSG00000242588.2	904.72870	1504.02000	-0.73330	12.42670	9.95690	K562	CCDC124
RP11-274B21.1	ENSG00000242588.2	951.15310	1556.90340	-0.71090	11.01670	9.00500	K562	MBNL1
RP11-274B21.1	ENSG00000242588.2	333.11600	140.78490	1.24240	9.54040	8.40450	HepG2	NCBP2
RP11-274B21.1	ENSG00000242588.2	291.94530	128.45830	1.18430	8.48550	7.31490	HepG2	HNRNPK
RP11-274B21.1	ENSG00000242588.2	287.41900	141.57560	1.02150	8.23890	7.30240	HepG2	SF3B4
RP11-274B21.1	ENSG00000242588.2	381.35120	628.84260	-0.72160	7.99630	6.90790	K562	PTBP1
RP11-274B21.1	ENSG00000242588.2	298.29380	135.50100	1.13830	7.92030	6.84070	HepG2	EIF4A3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 68 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-274B21.1 is not available on ENCORE database.

28 RBPs can affect the splicing of RP11-274B21.1 :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP11-274B21.1	ENSG00000242588.2	chr7	+	128249540	128249633			128231903	128232071	128255913	128256024	-0.20900	0.00000	0.00008	excluded	K562	AKAP8L
SE	RP11-274B21.1	ENSG00000242588.2	chr7	+	128249540	128249633			128231903	128232071	128255913	128256024	-0.28500	0.00000	0.00000	excluded	K562	PUS1
SE	RP11-274B21.1	ENSG00000242588.2	chr7	+	128218006	128218087			128214773	128214845	128218943	128218987	-0.24800	0.00000	0.00006	excluded	K562	PUS1
SE	RP11-274B21.1	ENSG00000242588.2	chr7	+	128249540	128249633			128231903	128232071	128255913	128256024	-0.20700	0.00000	0.00019	excluded	K562	UTP18
SE	RP11-274B21.1	ENSG00000242588.2	chr7	+	128249540	128249633			128231903	128232071	128255913	128256024	-0.18800	0.00000	0.00021	excluded	K562	RBM15
SE	RP11-274B21.1	ENSG00000242588.2	chr7	+	128249540	128249633			128231903	128232071	128255913	128256024	-0.30300	0.00000	0.00000	excluded	K562	AGGF1
SE	RP11-274B21.1	ENSG00000242588.2	chr7	+	128172265	128172392			128171751	128171854	128173698	128173784	0.22200	0.00001	0.00073	included	HepG2	SF3A3
SE	RP11-274B21.1	ENSG00000242588.2	chr7	+	128218006	128218087			128214773	128214845	128218943	128218987	-0.20000	0.00001	0.00089	excluded	K562	UTP18
MXE	RP11-274B21.1	ENSG00000242588.2	chr7	+	128214773	128214845	128218006	128218087	128173698	128173784	128218943	128218987	0.13900	0.00001	0.00059	1included	K562	PUS1
SE	RP11-274B21.1	ENSG00000242588.2	chr7	+	128265850	128265909			128263628	128263835	128266348	128266584	0.28700	0.00002	0.00155	included	K562	FXR1

Showing 1 to 10 of 46 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-274B21.1

General Information

Functions

Localization

Domains (AlphaFold: RP11-274B21.1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-274B21.1 is not avaliable on ENCORE database.

21 proteins are bound to RP11-274B21.1 RNA:

eCLIP assay for RP11-274B21.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-274B21.1 is not available on ENCORE database.

66 RBPs can affect the gene expression of RP11-274B21.1 :

The Knockdown/knockout RNA-Seq assay for RP11-274B21.1 is not available on ENCORE database.

28 RBPs can affect the splicing of RP11-274B21.1 :

The Knockdown/knockout RNA-Seq assay for RP11-274B21.1 is not avaliable on ENCORE database.