RP11-1055B8.7

General Information

Gene Name : RP11-1055B8.7
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-1055B8.7)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-1055B8.7 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-1055B8.7 RNA is bound by 23 proteins.

CanvasJS.com

eCLIP assay for RP11-1055B8.7 is not avaliable on ENCORE database.

23 proteins are bound to RP11-1055B8.7 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	79390397	79390464	+	intron-Distal	6.85717	23.56345	K562	EIF4G2
chr17	79390464	79390528	+	intron-Distal	5.65470	15.50335	K562	EIF4G2
chr17	79418165	79418203	+	intron-Distal	6.21514	13.20275	K562	DGCR8
chr17	79389623	79389672	+	intron-Distal	5.96000	11.49841	K562	EIF4G2
chr17	79387237	79387336	+	intron-Distal	4.06593	8.74164	HepG2	CSTF2T
chr17	79392839	79392920	+	intron-Distal	4.74808	8.60100	K562	EIF4G2
chr17	79374134	79374219	+	intron-Distal	4.36124	8.59510	K562	EWSR1
chr17	79374475	79374549	+	intron-Distal	5.02293	8.46281	HepG2	CSTF2T
chr17	79391038	79391080	+	intron-Distal	4.41003	8.03551	K562	EIF4G2
chr17	79374368	79374465	+	intron-Distal	5.17563	7.65828	HepG2	CSTF2T
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 136 entries

eCLIP assay for RP11-1055B8.7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-1055B8.7 is not available on ENCORE database.
119 RBPs can affect the levels of RP11-1055B8.7.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RP11-1055B8.7 is not available on ENCORE database.

119 RBPs can affect the gene expression of RP11-1055B8.7 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-1055B8.7	ENSG00000171282.9	84.84050	528.48520	-2.63900	67.78310	66.01850	HepG2	ZNF622
RP11-1055B8.7	ENSG00000171282.9	79.57340	434.90680	-2.45030	36.64480	34.90500	HepG2	BOP1
RP11-1055B8.7	ENSG00000171282.9	80.24170	431.87930	-2.42820	32.83320	31.04300	HepG2	HNRNPLL
RP11-1055B8.7	ENSG00000171282.9	131.53360	463.92730	-1.81850	29.97060	28.31950	HepG2	UTP3
RP11-1055B8.7	ENSG00000171282.9	148.72910	642.21730	-2.11040	26.36150	25.22650	HepG2	SRFBP1
RP11-1055B8.7	ENSG00000171282.9	115.63330	380.65400	-1.71890	20.86820	19.11450	HepG2	CALR
RP11-1055B8.7	ENSG00000171282.9	528.14940	215.48340	1.29330	19.99380	18.59350	HepG2	RECQL
RP11-1055B8.7	ENSG00000171282.9	328.31410	812.24280	-1.30680	19.38210	17.97430	K562	PUS1
RP11-1055B8.7	ENSG00000171282.9	45.41640	221.89420	-2.28860	18.12770	16.58470	HepG2	DDX21
RP11-1055B8.7	ENSG00000171282.9	655.10000	263.80620	1.31210	18.64460	16.49360	K562	TARDBP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 144 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-1055B8.7 is not available on ENCORE database.

3 RBPs can affect the splicing of RP11-1055B8.7 :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP11-1055B8.7	ENSG00000171282.9	chr17	+	79413763	79413856	79412379	79412707	79414061	79414874	-0.44200	0.00007	0.02405	excluded	K562	SAFB
SE	RP11-1055B8.7	ENSG00000171282.9	chr17	+	79413763	79413856	79412379	79412707	79414061	79414874	-0.24800	0.00095	0.05772	excluded	HepG2	FTO
SE	RP11-1055B8.7	ENSG00000171282.9	chr17	+	79413763	79413856	79412379	79412707	79414061	79414874	0.20500	0.00298	0.04646	included	K562	HNRNPC
SE	RP11-1055B8.7	ENSG00000171282.9	chr17	+	79413763	79413856	79412379	79412707	79414061	79414874	0.48600	0.00325	0.09390	included	HepG2	HNRNPC

Showing 1 to 4 of 4 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-1055B8.7

General Information

Functions

Localization

Domains (AlphaFold: RP11-1055B8.7)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-1055B8.7 is not avaliable on ENCORE database.

23 proteins are bound to RP11-1055B8.7 RNA:

eCLIP assay for RP11-1055B8.7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-1055B8.7 is not available on ENCORE database.

119 RBPs can affect the gene expression of RP11-1055B8.7 :

The Knockdown/knockout RNA-Seq assay for RP11-1055B8.7 is not available on ENCORE database.

3 RBPs can affect the splicing of RP11-1055B8.7 :

The Knockdown/knockout RNA-Seq assay for RP11-1055B8.7 is not avaliable on ENCORE database.