PRDX2

General Information

Gene Name : PRDX2
Gene ID : ENSG00000167815.11
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PRDX2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PRDX2	ENSG00000167815.11	69.65	230.08	149.87	ENCSR000AEF
HepG2	PRDX2	ENSG00000167815.11	443.69	282.35	363.02	ENCSR985KAT
K562	PRDX2	ENSG00000167815.11	504.00	437.23	470.62	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PRDX2 is not avaliable on ENCORE database.

Proteins bound to RNA

PRDX2 RNA is bound by 23 proteins.

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eCLIP assay for PRDX2 is not avaliable on ENCORE database.

23 proteins are bound to PRDX2 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	12907864	12907872	-	3'-UTR,intron-Distal	5.53067	400.00000	K562	PABPC4
chr19	12907834	12907852	-	3'-UTR,intron-Distal	6.03694	400.00000	K562	PABPC4
chr19	12907860	12907864	-	3'-UTR,intron-Distal	5.94961	400.00000	K562	PABPC4
chr19	12907823	12907834	-	3'-UTR,intron-Distal	5.16827	400.00000	K562	PABPC4
chr19	12907766	12907808	-	3'-UTR,intron-Distal	5.55624	400.00000	K562	PABPC4
chr19	12907852	12907860	-	3'-UTR,intron-Distal	5.98441	400.00000	K562	PABPC4
chr19	12907813	12907823	-	3'-UTR,intron-Distal	5.51857	400.00000	K562	PABPC4
chr19	12911831	12911847	-	CDS,intron-Distal	3.97469	400.00000	K562	YBX3
chr19	12907780	12907901	-	3'-UTR,CDS,intron-Distal	4.37085	77.66965	HepG2	DDX55
chr19	12907793	12907893	-	3'-UTR,intron-Distal	4.12347	73.59447	K562	RPS3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 90 entries

eCLIP assay for PRDX2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PRDX2 is not available on ENCORE database.
109 RBPs can affect the levels of PRDX2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PRDX2 is not available on ENCORE database.

109 RBPs can affect the gene expression of PRDX2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PRDX2	ENSG00000167815.7	501.13370	1386.39310	-1.46810	41.49710	38.55140	K562	U2AF2
PRDX2	ENSG00000167815.7	274.28700	1385.27050	-2.33640	29.28150	26.04660	K562	G3BP2
PRDX2	ENSG00000167815.7	3070.66440	4888.95040	-0.67100	24.11340	22.66020	HepG2	SF3B4
PRDX2	ENSG00000167815.7	3007.72430	4614.80200	-0.61760	20.39430	18.99420	HepG2	PCBP1
PRDX2	ENSG00000167815.7	3153.34660	4695.61970	-0.57440	17.80900	16.64870	HepG2	PTBP1
PRDX2	ENSG00000167815.7	7827.84580	5010.46480	0.64360	17.99130	16.44950	K562	RBM15
PRDX2	ENSG00000167815.7	3192.68550	5085.71480	-0.67170	17.61050	16.22990	HepG2	QKI
PRDX2	ENSG00000167815.7	2317.80440	3425.40340	-0.56350	17.42000	16.17310	HepG2	ACO1
PRDX2	ENSG00000167815.7	4154.16550	6001.93260	-0.53090	17.71000	16.06350	K562	UPF1
PRDX2	ENSG00000167815.7	3618.60450	5102.92240	-0.49590	15.38230	14.45950	HepG2	SRSF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 129 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PRDX2 is not available on ENCORE database.

6 RBPs can affect the splicing of PRDX2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
MXE	PRDX2	ENSG00000167815.7	chr19	-	12911729	12911883	12911968	12912084	12910729	12911113	12912553	12912602	0.15700	0.00000	0.00001	1included	K562	UCHL5
MXE	PRDX2	ENSG00000167815.7	chr19	-	12911729	12911883	12911968	12912084	12910729	12911113	12912553	12912602	-0.09400	0.00000	0.00001	2included	K562	LARP7
MXE	PRDX2	ENSG00000167815.7	chr19	-	12911729	12911883	12911968	12912084	12910729	12911113	12912553	12912602	0.22000	0.00000	0.00000	1included	K562	SUPV3L1
SE	PRDX2	ENSG00000167815.7	chr19	-	12910645	12910803			12907636	12907980	12910990	12911113	-0.05800	0.00002	0.00263	excluded	K562	EFTUD2
MXE	PRDX2	ENSG00000167815.7	chr19	-	12911729	12911883	12911968	12912084	12910729	12911113	12912553	12912602	-0.06300	0.00024	0.02166	2included	K562	PHF6
MXE	PRDX2	ENSG00000167815.7	chr19	-	12911729	12911883	12911968	12912084	12910729	12911113	12912553	12912602	0.08200	0.00194	0.08757	1included	K562	SERBP1

Showing 1 to 6 of 6 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PRDX2

General Information

Functions

Localization

Domains (AlphaFold: PRDX2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PRDX2 is not avaliable on ENCORE database.

23 proteins are bound to PRDX2 RNA:

eCLIP assay for PRDX2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PRDX2 is not available on ENCORE database.

109 RBPs can affect the gene expression of PRDX2 :

The Knockdown/knockout RNA-Seq assay for PRDX2 is not available on ENCORE database.

6 RBPs can affect the splicing of PRDX2 :

The Knockdown/knockout RNA-Seq assay for PRDX2 is not avaliable on ENCORE database.