POLR1D

General Information

Gene Name : POLR1D
Gene ID : ENSG00000186184.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: POLR1D)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	POLR1D	ENSG00000186184.17	183.14	151.90	167.52	ENCSR000AEF
HepG2	POLR1D	ENSG00000186184.17	133.38	229.97	181.68	ENCSR985KAT
K562	POLR1D	ENSG00000186184.17	111.25	114.06	112.66	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for POLR1D is not avaliable on ENCORE database.

Proteins bound to RNA

POLR1D RNA is bound by 15 proteins.

CanvasJS.com

eCLIP assay for POLR1D is not avaliable on ENCORE database.

15 proteins are bound to POLR1D RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr13	28197013	28197100	+	CDS,intron-Distal	3.79859	12.18084	HepG2	GRWD1
chr13	28197375	28197477	+	3'-UTR,CDS,intron-Distal	3.07906	11.60723	HepG2	LARP4
chr13	28196021	28196100	+	5'-UTR	3.52248	8.86075	K562	DDX3X
chr13	28196003	28196065	+	5'-UTR	3.12094	8.66768	K562	YBX3
chr13	28196170	28196248	+	intron-Distal,intron-Proximal	3.40452	8.63702	HepG2	EFTUD2
chr13	28197190	28197328	+	CDS,intron-Distal	3.62172	8.14124	HepG2	ZNF800
chr13	28241229	28241303	+	3'-UTR	5.29034	7.77688	K562	IGF2BP2
chr13	28197089	28197190	+	CDS,intron-Distal	5.01454	7.11126	HepG2	ZNF800
chr13	28197193	28197318	+	CDS,intron-Distal	4.35124	7.00156	K562	ZNF800
chr13	28197013	28197079	+	CDS,intron-Distal	3.04189	6.56117	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 29 entries

eCLIP assay for POLR1D is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for POLR1D is not available on ENCORE database.
114 RBPs can affect the levels of POLR1D.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for POLR1D is not available on ENCORE database.

114 RBPs can affect the gene expression of POLR1D :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
POLR1D	ENSG00000186184.11	1689.56060	4472.29000	-1.40440	96.35680	94.50550	HepG2	SRSF1
POLR1D	ENSG00000186184.11	1654.31700	4580.05000	-1.46910	94.27670	92.26310	HepG2	NELFE
POLR1D	ENSG00000186184.11	656.21170	1946.87560	-1.56890	55.44790	53.75040	HepG2	TIAL1
POLR1D	ENSG00000186184.11	1611.59530	3322.98010	-1.04400	49.00970	47.50420	HepG2	SSB
POLR1D	ENSG00000186184.11	1504.38540	4486.53300	-1.57640	41.42660	39.15870	HepG2	MAGOH
POLR1D	ENSG00000186184.11	1383.96460	4445.03400	-1.68340	39.80340	37.44200	HepG2	EIF4A3
POLR1D	ENSG00000186184.11	2396.26080	4265.57920	-0.83200	34.32660	32.61700	HepG2	RECQL
POLR1D	ENSG00000186184.11	5518.74880	2710.26730	1.02580	34.92780	32.54670	HepG2	RBM15
POLR1D	ENSG00000186184.11	2272.71380	4054.19880	-0.83500	33.42470	31.74300	HepG2	ETF1
POLR1D	ENSG00000186184.11	1637.08460	4511.62510	-1.46250	32.22610	30.25210	HepG2	MATR3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 126 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for POLR1D is not available on ENCORE database.

12 RBPs can affect the splicing of POLR1D :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	POLR1D	ENSG00000186184.11	chr13	+	28197011	28197247	28195473	28196146	28222515	28222590	-0.28900	0.00000	0.00000	excluded	HepG2	PRPF8
SE	POLR1D	ENSG00000186184.11	chr13	+	28224178	28224378	28222515	28222590	28239822	28241548	-0.28700	0.00000	0.00000	excluded	HepG2	U2AF2
SE	POLR1D	ENSG00000186184.11	chr13	+	28224178	28224378	28222515	28222590	28239822	28241548	-0.09800	0.00000	0.00089	excluded	HepG2	AKAP1
SE	POLR1D	ENSG00000186184.11	chr13	+	28224178	28224352	28222515	28222590	28239822	28241548	0.26800	0.00000	0.00194	included	HepG2	UCHL5
SE	POLR1D	ENSG00000186184.11	chr13	+	28224178	28224378	28222515	28222590	28239822	28241548	0.15300	0.00000	0.00007	included	HepG2	LARP4
SE	POLR1D	ENSG00000186184.11	chr13	+	28224178	28224378	28222515	28222590	28239822	28241548	-0.15800	0.00000	0.00000	excluded	HepG2	SRSF1
SE	POLR1D	ENSG00000186184.11	chr13	+	28224178	28224378	28222515	28222590	28239822	28241548	-0.06700	0.00002	0.00085	excluded	HepG2	U2AF1
A3SS	POLR1D	ENSG00000186184.11	chr13	+	28239766	28239890	28239822	28239890	28222420	28222590	0.07700	0.00002	0.00023	longer	K562	AQR
SE	POLR1D	ENSG00000186184.11	chr13	+	28222515	28222586	28196011	28196146	28239822	28241547	-0.08300	0.00003	0.00087	excluded	K562	PUS1
SE	POLR1D	ENSG00000186184.11	chr13	+	28224178	28224378	28222515	28222590	28239822	28241548	-0.07100	0.00010	0.00297	excluded	K562	U2AF2

Showing 1 to 10 of 14 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

POLR1D

General Information

Functions

Localization

Domains (AlphaFold: POLR1D)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for POLR1D is not avaliable on ENCORE database.

15 proteins are bound to POLR1D RNA:

eCLIP assay for POLR1D is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for POLR1D is not available on ENCORE database.

114 RBPs can affect the gene expression of POLR1D :

The Knockdown/knockout RNA-Seq assay for POLR1D is not available on ENCORE database.

12 RBPs can affect the splicing of POLR1D :

The Knockdown/knockout RNA-Seq assay for POLR1D is not avaliable on ENCORE database.