PARP12

General Information

Gene Name : PARP12
Gene ID : ENSG00000059378.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PARP12)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PARP12	ENSG00000059378.12	12.42	13.27	12.84	ENCSR000AEF
HepG2	PARP12	ENSG00000059378.12	8.93	9.01	8.97	ENCSR985KAT
K562	PARP12	ENSG00000059378.12	17.81	18.61	18.21	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project	Note
PARP12	Ribo-STAMP-293T	shRNA			BGRSLV10-19,BGRSLV10-20	BGRSLV10-1,BGRSLV10-2		NotSatisfied	ENCORE2

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PARP12 is not avaliable on ENCORE database.

Proteins bound to RNA

PARP12 RNA is bound by 10 proteins.

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eCLIP assay for PARP12 is not avaliable on ENCORE database.

10 proteins are bound to PARP12 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	139728362	139728477	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.98895	13.44390	HepG2	PRPF8
chr7	139735621	139735761	-	intron-Distal	4.88238	13.25687	HepG2	PCBP2
chr7	139725919	139726003	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.62237	9.23760	K562	AQR
chr7	139735625	139735739	-	intron-Distal	4.70533	8.54663	K562	PTBP1
chr7	139739399	139739485	-	intron-Distal	3.84351	6.51675	HepG2	SUGP2
chr7	139728495	139728605	-	intron-Distal,intron-Proximal	4.51457	6.28383	K562	KHSRP
chr7	139728838	139728912	-	intron-Distal	3.56255	5.83959	K562	KHSRP
chr7	139728769	139728838	-	intron-Distal	3.51457	5.38829	K562	KHSRP
chr7	139754545	139754614	-	CDS,intron-Distal,intron-Proximal	4.08994	5.16342	K562	SF3B4
chr7	139734144	139734223	-	intron-Distal,intron-Proximal	3.43343	5.14864	K562	KHSRP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 23 entries

eCLIP assay for PARP12 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PARP12 is not available on ENCORE database.
85 RBPs can affect the levels of PARP12.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PARP12 is not available on ENCORE database.

85 RBPs can affect the gene expression of PARP12 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PARP12	ENSG00000059378.8	121.43040	610.40830	-2.32960	58.89550	57.29220	HepG2	SSB
PARP12	ENSG00000059378.8	237.24790	622.04840	-1.39060	24.59200	23.29900	HepG2	NELFE
PARP12	ENSG00000059378.8	1492.00400	940.84730	0.66510	17.66200	15.99910	K562	NSUN2
PARP12	ENSG00000059378.8	101.66660	290.65120	-1.51540	12.90740	11.68110	HepG2	HNRNPA1
PARP12	ENSG00000059378.8	312.12360	579.35350	-0.89230	11.72040	10.58530	HepG2	RECQL
PARP12	ENSG00000059378.8	2657.96140	1698.16250	0.64620	11.61140	9.69150	K562	CELF1
PARP12	ENSG00000059378.8	257.68020	481.22180	-0.90110	10.41940	9.27580	HepG2	DKC1
PARP12	ENSG00000059378.8	318.84830	549.30820	-0.78470	9.65510	8.63170	HepG2	PCBP1
PARP12	ENSG00000059378.8	821.83950	526.52340	0.64230	9.70400	8.53210	HepG2	UPF1
PARP12	ENSG00000059378.8	144.50150	318.70870	-1.14120	9.70200	8.51330	HepG2	DDX21
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 99 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PARP12 is not available on ENCORE database.

10 RBPs can affect the splicing of PARP12 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PARP12	ENSG00000059378.8	chr7	-	139733774	139733881			139728412	139728488	139734034	139734131	0.22300	0.00000	0.00516	included	K562	PABPC4
A3SS	PARP12	ENSG00000059378.8	chr7	-	139737514	139737761			139737514	139737656	139741443	139741639	0.38200	0.00000	0.00000	longer	HepG2	U2AF2
MXE	PARP12	ENSG00000059378.8	chr7	-	139737514	139737656	139741443	139741639	139734034	139734131	139746683	139746807	-0.28800	0.00007	0.00087	2included	HepG2	U2AF2
SE	PARP12	ENSG00000059378.8	chr7	-	139733774	139733881			139728412	139728488	139734034	139734131	0.14700	0.00010	0.06041	included	K562	TAF15
SE	PARP12	ENSG00000059378.8	chr7	-	139737514	139737656			139734034	139734131	139741443	139741639	-0.24200	0.00011	0.00297	excluded	K562	HNRNPC
MXE	PARP12	ENSG00000059378.8	chr7	-	139737514	139737656	139741443	139741639	139734034	139734131	139754461	139754563	0.21700	0.00018	0.00513	1included	K562	HNRNPC
SE	PARP12	ENSG00000059378.8	chr7	-	139757410	139757573			139756655	139756953	139757698	139757850	0.05700	0.00036	0.00508	included	K562	AQR
SE	PARP12	ENSG00000059378.8	chr7	-	139737514	139737656			139734034	139734131	139741443	139741639	-0.47600	0.00036	0.00858	excluded	K562	U2AF2
MXE	PARP12	ENSG00000059378.8	chr7	-	139727075	139727206	139728412	139728488	139725996	139726148	139734034	139734131	-0.22000	0.00098	0.03637	2included	K562	AGGF1
MXE	PARP12	ENSG00000059378.8	chr7	-	139741443	139741639	139746683	139746807	139734034	139734131	139754461	139754563	-0.27900	0.00105	0.02147	2included	K562	HNRNPC

Showing 1 to 10 of 22 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PARP12

General Information

Functions

Localization

Domains (AlphaFold: PARP12)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PARP12 is not avaliable on ENCORE database.

10 proteins are bound to PARP12 RNA:

eCLIP assay for PARP12 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PARP12 is not available on ENCORE database.

85 RBPs can affect the gene expression of PARP12 :

The Knockdown/knockout RNA-Seq assay for PARP12 is not available on ENCORE database.

10 RBPs can affect the splicing of PARP12 :

The Knockdown/knockout RNA-Seq assay for PARP12 is not avaliable on ENCORE database.