MSANTD3

General Information

Gene Name : MSANTD3
Gene ID : ENSG00000066697.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MSANTD3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MSANTD3	ENSG00000066697.14	11.38	13.75	12.57	ENCSR000AEF
HepG2	MSANTD3	ENSG00000066697.14	10.90	18.84	14.87	ENCSR985KAT
K562	MSANTD3	ENSG00000066697.14	14.90	17.88	16.39	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MSANTD3 is not avaliable on ENCORE database.

Proteins bound to RNA

MSANTD3 RNA is bound by 4 proteins.

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eCLIP assay for MSANTD3 is not avaliable on ENCORE database.

4 proteins are bound to MSANTD3 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr9	103213231	103213328	+	3'-UTR,CDS,intron-Distal	5.07230	17.98612	K562	PUM2
chr9	103212886	103212992	+	3'-UTR,CDS,intron-Distal	3.71959	6.76362	K562	YBX3
chr9	103212895	103212943	+	3'-UTR,CDS,intron-Distal	4.14061	6.37184	K562	RBM15
chr9	103213189	103213254	+	3'-UTR,CDS,intron-Distal	4.18161	4.95438	K562	YBX3
chr9	103204638	103204700	+	intron-Proximal	3.84233	4.52312	K562	AQR
chr9	103204417	103204478	+	CDS	3.77113	3.46958	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 6 of 6 entries

eCLIP assay for MSANTD3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MSANTD3 is not available on ENCORE database.
59 RBPs can affect the levels of MSANTD3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MSANTD3 is not available on ENCORE database.

59 RBPs can affect the gene expression of MSANTD3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MSANTD3	ENSG00000066697.10	1075.14290	362.67860	1.56770	42.92030	41.34950	HepG2	RBM22
MSANTD3	ENSG00000066697.10	488.73720	201.50930	1.27810	20.83490	19.57780	HepG2	SRSF9
MSANTD3	ENSG00000066697.10	488.41790	229.75390	1.08790	16.10310	14.89490	HepG2	ACO1
MSANTD3	ENSG00000066697.10	613.19310	355.03010	0.78830	12.00990	11.07010	HepG2	ZNF622
MSANTD3	ENSG00000066697.10	784.86440	363.39150	1.11080	12.06810	10.62360	HepG2	FIP1L1
MSANTD3	ENSG00000066697.10	679.24780	409.62170	0.72950	9.93050	9.14110	HepG2	SRFBP1
MSANTD3	ENSG00000066697.10	586.48650	342.00230	0.77800	9.57690	8.51790	HepG2	CELF1
MSANTD3	ENSG00000066697.10	507.86860	235.68610	1.10750	8.34010	7.17840	HepG2	EIF4B
MSANTD3	ENSG00000066697.10	531.69530	276.90300	0.94110	7.19070	6.37790	HepG2	AKAP1
MSANTD3	ENSG00000066697.10	423.07450	265.48200	0.67220	6.76030	5.82340	HepG2	SMN1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 64 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MSANTD3 is not available on ENCORE database.

5 RBPs can affect the splicing of MSANTD3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	MSANTD3	ENSG00000066697.10	chr9	+	103206409	103207519	103204430	103204638	103212838	103213511	0.07200	0.00023	0.04385	included	K562	EIF4G2
SE	MSANTD3	ENSG00000066697.10	chr9	+	103206409	103207519	103204430	103204638	103212838	103213511	0.15500	0.00071	0.03341	included	HepG2	MATR3
SE	MSANTD3	ENSG00000066697.10	chr9	+	103207450	103207519	103204187	103204638	103212838	103212987	0.09600	0.00155	0.06222	included	HepG2	SFPQ
SE	MSANTD3	ENSG00000066697.10	chr9	+	103207450	103207508	103204187	103204638	103212838	103212963	-0.05800	0.00338	0.03870	excluded	HepG2	U2AF2
SE	MSANTD3	ENSG00000066697.10	chr9	+	103206409	103207519	103204430	103204638	103212838	103213511	0.08300	0.00581	0.08507	included	K562	SRSF1

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MSANTD3

General Information

Functions

Localization

Domains (AlphaFold: MSANTD3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MSANTD3 is not avaliable on ENCORE database.

4 proteins are bound to MSANTD3 RNA:

eCLIP assay for MSANTD3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MSANTD3 is not available on ENCORE database.

59 RBPs can affect the gene expression of MSANTD3 :

The Knockdown/knockout RNA-Seq assay for MSANTD3 is not available on ENCORE database.

5 RBPs can affect the splicing of MSANTD3 :

The Knockdown/knockout RNA-Seq assay for MSANTD3 is not avaliable on ENCORE database.