LAMTOR2

General Information

Gene Name : LAMTOR2
Gene ID : ENSG00000116586.11
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: LAMTOR2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	LAMTOR2	ENSG00000116586.11	22.03	48.93	35.48	ENCSR000AEF
HepG2	LAMTOR2	ENSG00000116586.11	69.04	46.24	57.64	ENCSR985KAT
K562	LAMTOR2	ENSG00000116586.11	58.96	43.02	50.99	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for LAMTOR2 is not avaliable on ENCORE database.

Proteins bound to RNA

LAMTOR2 RNA is bound by 6 proteins.

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eCLIP assay for LAMTOR2 is not avaliable on ENCORE database.

6 proteins are bound to LAMTOR2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	156024666	156024740	+	5'-UTR,CDS	5.07310	11.81272	K562	DDX3X
chr1	156025059	156025170	+	CDS	3.56170	11.71300	K562	YBX3
chr1	156024606	156024746	+	5'-UTR,CDS	3.11351	8.45630	K562	YBX3
chr1	156028104	156028169	+	3'-UTR,CDS,intron-Proximal	3.87518	5.75263	HepG2	LARP4
chr1	156024636	156024710	+	5'-UTR,CDS	4.74541	5.00258	K562	FTO
chr1	156025060	156025108	+	CDS	3.76771	4.84938	K562	DDX3X
chr1	156028197	156028257	+	3'-UTR	3.65277	4.08867	HepG2	LARP4
chr1	156027766	156027813	+	CDS,intron-Distal,intron-Proximal	3.36697	3.73423	K562	UCHL5
chr1	156025190	156025223	+	CDS,intron-Proximal	3.11736	3.12941	K562	UCHL5
chr1	156025168	156025247	+	CDS,intron-Proximal	3.95008	3.12746	HepG2	GRWD1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 10 entries

eCLIP assay for LAMTOR2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for LAMTOR2 is not available on ENCORE database.
69 RBPs can affect the levels of LAMTOR2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for LAMTOR2 is not available on ENCORE database.

69 RBPs can affect the gene expression of LAMTOR2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
LAMTOR2	ENSG00000116586.7	37.00190	194.98070	-2.39770	17.54100	15.36250	K562	G3BP2
LAMTOR2	ENSG00000116586.7	146.21470	383.37060	-1.39070	13.31380	11.89020	HepG2	HNRNPK
LAMTOR2	ENSG00000116586.7	471.98890	264.43350	0.83570	10.52950	9.40660	HepG2	SMN1
LAMTOR2	ENSG00000116586.7	162.99750	349.53490	-1.10060	9.94630	8.72500	HepG2	RBM25
LAMTOR2	ENSG00000116586.7	415.37130	204.99030	1.01870	9.36920	8.31750	HepG2	RPS19
LAMTOR2	ENSG00000116586.7	447.82020	247.39080	0.85600	8.50820	7.71830	HepG2	TIAL1
LAMTOR2	ENSG00000116586.7	867.96270	462.73730	0.90730	8.42730	7.55410	HepG2	AKAP1
LAMTOR2	ENSG00000116586.7	156.90200	333.50660	-1.08790	10.45320	7.29750	K562	HNRNPH1
LAMTOR2	ENSG00000116586.7	773.56970	508.37330	0.60550	7.86260	6.97500	K562	AGGF1
LAMTOR2	ENSG00000116586.7	86.30020	195.19580	-1.17750	7.74370	6.39260	K562	U2AF2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 72 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for LAMTOR2 is not available on ENCORE database.

4 RBPs can affect the splicing of LAMTOR2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A5SS	LAMTOR2	ENSG00000116586.7	chr1	+	156024640	156024817	156024640	156024748	156025053	156025216	0.05700	0.00000	0.00000	longer	K562	AQR
SE	LAMTOR2	ENSG00000116586.7	chr1	+	156027768	156027858	156025053	156025216	156028105	156028301	-0.15600	0.00009	0.00311	excluded	K562	U2AF1
SE	LAMTOR2	ENSG00000116586.7	chr1	+	156027768	156027858	156025361	156025466	156028105	156028301	-0.07900	0.00059	0.00786	excluded	K562	AQR
SE	LAMTOR2	ENSG00000116586.7	chr1	+	156025361	156025466	156025053	156025216	156027768	156027858	0.14200	0.00068	0.01486	included	HepG2	U2AF1
SE	LAMTOR2	ENSG00000116586.7	chr1	+	156027768	156027858	156025053	156025216	156028105	156028301	0.10300	0.00070	0.07295	included	HepG2	RBFOX2
SE	LAMTOR2	ENSG00000116586.7	chr1	+	156027768	156027858	156025053	156025216	156028105	156028301	0.10300	0.00095	0.04395	included	HepG2	SFPQ
SE	LAMTOR2	ENSG00000116586.7	chr1	+	156027768	156027858	156025361	156025466	156028105	156028301	-0.20000	0.00293	0.04962	excluded	HepG2	U2AF1

Showing 1 to 7 of 7 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

LAMTOR2

General Information

Functions

Localization

Domains (AlphaFold: LAMTOR2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for LAMTOR2 is not avaliable on ENCORE database.

6 proteins are bound to LAMTOR2 RNA:

eCLIP assay for LAMTOR2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for LAMTOR2 is not available on ENCORE database.

69 RBPs can affect the gene expression of LAMTOR2 :

The Knockdown/knockout RNA-Seq assay for LAMTOR2 is not available on ENCORE database.

4 RBPs can affect the splicing of LAMTOR2 :

The Knockdown/knockout RNA-Seq assay for LAMTOR2 is not avaliable on ENCORE database.