DECR1

General Information

Gene Name : DECR1
Gene ID : ENSG00000104325.6
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: DECR1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	DECR1	ENSG00000104325.6	79.77	74.18	76.97	ENCSR000AEF
HepG2	DECR1	ENSG00000104325.6	23.93	49.52	36.73	ENCSR985KAT
K562	DECR1	ENSG00000104325.6	64.68	67.92	66.30	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for DECR1 is not avaliable on ENCORE database.

Proteins bound to RNA

DECR1 RNA is bound by 15 proteins.

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eCLIP assay for DECR1 is not avaliable on ENCORE database.

15 proteins are bound to DECR1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	91049117	91049169	+	3'-UTR,CDS,intron-Distal,intron-Proximal	6.27262	63.88726	K562	LIN28B
chr8	91054955	91054981	+	3'-UTR,CDS,intron-Proximal	6.03119	38.81001	K562	LIN28B
chr8	91021366	91021561	+	intron-Distal	4.25087	9.62214	HepG2	PCBP2
chr8	91034934	91035068	+	intron-Distal	4.87482	7.56720	K562	PTBP1
chr8	91018165	91018266	+	5'-UTR,intron-Distal,intron-Proximal	3.17136	6.38431	K562	SAFB2
chr8	91064105	91064179	+	3'-UTR,CDS	3.27832	6.32494	K562	UCHL5
chr8	91057082	91057198	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.05237	5.76422	K562	UCHL5
chr8	91021451	91021532	+	intron-Distal	3.50531	5.63113	K562	RBFOX2
chr8	91017640	91017770	+	5'-UTR,intron-Distal,intron-Proximal	4.35845	5.61423	K562	SAFB
chr8	91034940	91035059	+	intron-Distal	3.97660	5.36899	HepG2	PTBP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 24 entries

eCLIP assay for DECR1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for DECR1 is not available on ENCORE database.
93 RBPs can affect the levels of DECR1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for DECR1 is not available on ENCORE database.

93 RBPs can affect the gene expression of DECR1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DECR1	ENSG00000104325.2	759.82770	2006.15660	-1.40070	31.83450	30.04050	K562	AQR
DECR1	ENSG00000104325.2	1239.37460	610.89460	1.02050	25.56790	24.02490	HepG2	DKC1
DECR1	ENSG00000104325.2	1722.32040	1010.22670	0.76960	20.57500	19.45690	HepG2	SSB
DECR1	ENSG00000104325.2	444.85540	922.47060	-1.05220	16.47140	15.09420	K562	HNRNPC
DECR1	ENSG00000104325.2	661.15920	1385.89000	-1.06770	15.84270	13.80010	K562	HNRNPU
DECR1	ENSG00000104325.2	620.03830	1207.54100	-0.96160	13.84200	12.39660	HepG2	HNRNPK
DECR1	ENSG00000104325.2	1699.94160	1185.53760	0.51980	9.85290	9.08370	HepG2	SRSF1
DECR1	ENSG00000104325.2	758.42840	1228.12710	-0.69540	10.82550	9.07630	K562	SF3B4
DECR1	ENSG00000104325.2	653.43240	1199.43770	-0.87620	9.31770	8.25650	HepG2	DDX6
DECR1	ENSG00000104325.2	519.42190	934.08440	-0.84660	9.58620	7.78880	K562	EFTUD2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 107 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for DECR1 is not available on ENCORE database.

22 RBPs can affect the splicing of DECR1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	DECR1	ENSG00000104325.2	chr8	+	91029351	91029554	91013632	91013789	91031136	91031194	-0.26000	0.00000	0.00000	excluded	K562	SRSF1
SE	DECR1	ENSG00000104325.2	chr8	+	91029351	91029554	91013632	91013789	91031136	91031194	-0.16600	0.00000	0.00016	excluded	K562	XRCC6
SE	DECR1	ENSG00000104325.2	chr8	+	91029351	91029554	91013632	91013789	91031136	91031194	-0.14300	0.00000	0.00030	excluded	K562	PCBP1
SE	DECR1	ENSG00000104325.2	chr8	+	91029351	91029554	91013632	91013789	91031136	91031194	-0.11500	0.00000	0.00035	excluded	HepG2	TAF15
SE	DECR1	ENSG00000104325.2	chr8	+	91017675	91017959	91013704	91013789	91029351	91029554	0.17300	0.00000	0.00049	included	K562	CPSF6
SE	DECR1	ENSG00000104325.2	chr8	+	91029351	91029554	91013632	91013789	91031136	91031194	0.07200	0.00001	0.00102	included	HepG2	NCBP2
SE	DECR1	ENSG00000104325.2	chr8	+	91027768	91027894	91013715	91013789	91029351	91029554	0.06600	0.00001	0.00037	included	K562	U2AF1
SE	DECR1	ENSG00000104325.2	chr8	+	91049068	91049168	91033136	91033284	91054966	91055028	0.15600	0.00004	0.00088	included	HepG2	U2AF2
SE	DECR1	ENSG00000104325.2	chr8	+	91029351	91029554	91013632	91013789	91031136	91031194	0.13300	0.00006	0.02451	included	HepG2	ILF3
SE	DECR1	ENSG00000104325.2	chr8	+	91029351	91029554	91013632	91013789	91031136	91031194	-0.11200	0.00008	0.00487	excluded	K562	TARDBP

Showing 1 to 10 of 30 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

DECR1

General Information

Functions

Localization

Domains (AlphaFold: DECR1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for DECR1 is not avaliable on ENCORE database.

15 proteins are bound to DECR1 RNA:

eCLIP assay for DECR1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for DECR1 is not available on ENCORE database.

93 RBPs can affect the gene expression of DECR1 :

The Knockdown/knockout RNA-Seq assay for DECR1 is not available on ENCORE database.

22 RBPs can affect the splicing of DECR1 :

The Knockdown/knockout RNA-Seq assay for DECR1 is not avaliable on ENCORE database.