CAMTA1

General Information

Gene Name : CAMTA1
Gene ID : ENSG00000171735.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CAMTA1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CAMTA1	ENSG00000171735.18	79.83	76.22	78.03	ENCSR000AEF
HepG2	CAMTA1	ENSG00000171735.18	34.10	58.94	46.52	ENCSR985KAT
K562	CAMTA1	ENSG00000171735.18	98.74	108.15	103.44	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CAMTA1 is not avaliable on ENCORE database.

Proteins bound to RNA

CAMTA1 RNA is bound by 31 proteins.

CanvasJS.com

eCLIP assay for CAMTA1 is not avaliable on ENCORE database.

31 proteins are bound to CAMTA1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	7765275	7765368	+	intron-Distal	5.95583	27.24531	HepG2	FAM120A
chr1	6997876	6997988	+	intron-Distal	5.18209	20.33798	K562	AGGF1
chr1	7764320	7764403	+	intron-Distal	6.25491	19.76381	HepG2	CSTF2T
chr1	7765400	7765503	+	intron-Distal	6.32270	18.72851	HepG2	CSTF2T
chr1	7163142	7163226	+	intron-Distal	6.41614	15.69497	K562	AGGF1
chr1	7164338	7164483	+	intron-Distal	6.49548	15.23193	K562	AGGF1
chr1	6997275	6997433	+	intron-Distal	4.86693	14.94144	HepG2	HNRNPL
chr1	7765677	7765737	+	intron-Distal	5.05667	14.82746	HepG2	CSTF2T
chr1	7765297	7765374	+	intron-Distal	5.30209	14.57207	HepG2	CSTF2T
chr1	7208193	7208360	+	intron-Distal	5.39582	14.13591	K562	AGGF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 116 entries

eCLIP assay for CAMTA1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CAMTA1 is not available on ENCORE database.
68 RBPs can affect the levels of CAMTA1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CAMTA1 is not available on ENCORE database.

68 RBPs can affect the gene expression of CAMTA1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CAMTA1	ENSG00000171735.14	952.58420	390.73900	1.28550	26.19770	24.51380	HepG2	ZC3H8
CAMTA1	ENSG00000171735.14	1208.68840	410.32380	1.55850	26.10080	24.41270	HepG2	SUPV3L1
CAMTA1	ENSG00000171735.14	1080.26820	597.84350	0.85340	17.27500	15.97850	K562	AGGF1
CAMTA1	ENSG00000171735.14	797.64630	480.73580	0.73040	11.23700	9.82570	HepG2	AKAP8L
CAMTA1	ENSG00000171735.14	363.16100	610.66790	-0.74980	9.62180	8.49400	K562	DDX47
CAMTA1	ENSG00000171735.14	1092.87780	616.95550	0.82480	8.73070	7.81470	K562	PUS1
CAMTA1	ENSG00000171735.14	1049.58550	622.08000	0.75450	8.24830	7.06050	K562	AKAP8L
CAMTA1	ENSG00000171735.14	926.28050	488.52600	0.92290	7.69810	6.58080	HepG2	EIF4B
CAMTA1	ENSG00000171735.14	800.23770	457.79320	0.80560	7.36240	6.34850	HepG2	GPKOW
CAMTA1	ENSG00000171735.14	714.72660	432.42850	0.72480	6.86560	5.79490	HepG2	SF3B1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 75 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CAMTA1 is not available on ENCORE database.

11 RBPs can affect the splicing of CAMTA1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CAMTA1	ENSG00000171735.14	chr1	+	6931816	6931900	6885151	6885270	6947713	6947847	-0.08900	0.00012	0.00687	excluded	K562	HNRNPU
SE	CAMTA1	ENSG00000171735.14	chr1	+	6946299	6946406	6931816	6931900	6947713	6948248	0.39700	0.00013	0.00241	included	HepG2	U2AF2
SE	CAMTA1	ENSG00000171735.14	chr1	+	6880240	6880310	6845590	6845635	6885151	6885270	-0.10800	0.00015	0.00846	excluded	K562	HNRNPU
SE	CAMTA1	ENSG00000171735.14	chr1	+	6880240	6880310	6845550	6845635	6885151	6885270	0.13700	0.00021	0.01436	included	HepG2	SFPQ
SE	CAMTA1	ENSG00000171735.14	chr1	+	6880240	6880310	6845550	6845635	6885151	6885270	0.07800	0.00032	0.07566	included	K562	PUM1
SE	CAMTA1	ENSG00000171735.14	chr1	+	6931816	6931900	6885151	6885270	6947713	6947847	-0.08700	0.00042	0.03069	excluded	HepG2	RBM22
SE	CAMTA1	ENSG00000171735.14	chr1	+	6867042	6867148	6845577	6845635	6885151	6885270	0.20100	0.00049	0.04348	included	HepG2	DDX6
SE	CAMTA1	ENSG00000171735.14	chr1	+	6880240	6880310	6845590	6845635	6885151	6885270	0.11000	0.00107	0.07570	included	K562	SUPV3L1
SE	CAMTA1	ENSG00000171735.14	chr1	+	6880240	6880310	6845590	6845635	6885151	6885270	0.09300	0.00148	0.03515	included	HepG2	SRSF1
SE	CAMTA1	ENSG00000171735.14	chr1	+	6946299	6946406	6885169	6885270	6947713	6948248	-0.38900	0.00219	0.04915	excluded	K562	RBM15

Showing 1 to 10 of 13 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CAMTA1

General Information

Functions

Localization

Domains (AlphaFold: CAMTA1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CAMTA1 is not avaliable on ENCORE database.

31 proteins are bound to CAMTA1 RNA:

eCLIP assay for CAMTA1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CAMTA1 is not available on ENCORE database.

68 RBPs can affect the gene expression of CAMTA1 :

The Knockdown/knockout RNA-Seq assay for CAMTA1 is not available on ENCORE database.

11 RBPs can affect the splicing of CAMTA1 :

The Knockdown/knockout RNA-Seq assay for CAMTA1 is not avaliable on ENCORE database.