B4GALT4

General Information

Gene Name : B4GALT4
Gene ID : ENSG00000121578.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: B4GALT4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	B4GALT4	ENSG00000121578.12	8.16	5.99	7.08	ENCSR000AEF
HepG2	B4GALT4	ENSG00000121578.12	19.28	24.23	21.76	ENCSR985KAT
K562	B4GALT4	ENSG00000121578.12	6.38	6.77	6.57	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for B4GALT4 is not avaliable on ENCORE database.

Proteins bound to RNA

B4GALT4 RNA is bound by 3 proteins.

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eCLIP assay for B4GALT4 is not avaliable on ENCORE database.

3 proteins are bound to B4GALT4 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	118942863	118942935	-	CDS,intron-Distal,intron-Proximal	3.86677	7.26133	HepG2	PRPF8
chr3	118937521	118937584	-	CDS,intron-Distal,intron-Proximal	4.70902	4.35676	HepG2	PRPF8
chr3	118930922	118931047	-	3'-UTR,CDS,intron-Distal	3.30451	3.54552	HepG2	LARP4
chr3	118948834	118948889	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.84363	3.28989	K562	RBM15
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 4 of 4 entries

eCLIP assay for B4GALT4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for B4GALT4 is not available on ENCORE database.
63 RBPs can affect the levels of B4GALT4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for B4GALT4 is not available on ENCORE database.

63 RBPs can affect the gene expression of B4GALT4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
B4GALT4	ENSG00000121578.8	337.88200	931.70600	-1.46340	22.24340	20.67060	HepG2	EIF2S1
B4GALT4	ENSG00000121578.8	360.60590	720.48170	-0.99850	20.38220	19.23550	HepG2	ZNF622
B4GALT4	ENSG00000121578.8	265.58040	589.56310	-1.15050	19.17350	17.32520	HepG2	PARN
B4GALT4	ENSG00000121578.8	516.91600	918.59780	-0.82950	14.52310	13.46130	HepG2	PTBP1
B4GALT4	ENSG00000121578.8	283.65960	597.12570	-1.07390	12.60020	11.44570	HepG2	BOP1
B4GALT4	ENSG00000121578.8	365.28890	632.47100	-0.79200	10.71390	9.65880	HepG2	UTP3
B4GALT4	ENSG00000121578.8	643.05590	1022.31060	-0.66880	10.42080	9.49390	HepG2	NELFE
B4GALT4	ENSG00000121578.8	648.64290	959.48090	-0.56480	9.59680	8.63170	HepG2	PUM1
B4GALT4	ENSG00000121578.8	598.62590	892.41990	-0.57610	7.95340	6.96350	HepG2	SRSF5
B4GALT4	ENSG00000121578.8	560.45800	963.68160	-0.78200	7.67550	6.59440	HepG2	G3BP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 70 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for B4GALT4 is not available on ENCORE database.

7 RBPs can affect the splicing of B4GALT4 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	B4GALT4	ENSG00000121578.8	chr3	-	118937496	118937619			118935086	118935191	118942904	118943092	-0.26500	0.00000	0.00001	excluded	HepG2	U2AF1
SE	B4GALT4	ENSG00000121578.8	chr3	-	118937496	118937619			118935086	118935191	118942904	118943092	-0.32400	0.00000	0.00000	excluded	HepG2	U2AF2
SE	B4GALT4	ENSG00000121578.8	chr3	-	118959207	118959377			118955699	118955917	118959696	118959754	0.28000	0.00000	0.00028	included	HepG2	DDX3X
SE	B4GALT4	ENSG00000121578.8	chr3	-	118953991	118954074			118949002	118949091	118955699	118955917	0.24700	0.00001	0.00104	included	HepG2	MATR3
A3SS	B4GALT4	ENSG00000121578.8	chr3	-	118945785	118945954			118945785	118945888	118948693	118949091	0.17100	0.00001	0.00008	longer	K562	AQR
MXE	B4GALT4	ENSG00000121578.8	chr3	-	118948693	118949091	118955699	118955917	118945655	118945888	118959696	118959725	-0.14400	0.00031	0.01459	2included	HepG2	TAF15
SE	B4GALT4	ENSG00000121578.8	chr3	-	118953991	118954074			118949002	118949091	118955699	118955917	0.34100	0.00065	0.08801	included	K562	MATR3
SE	B4GALT4	ENSG00000121578.8	chr3	-	118959207	118959377			118955699	118955917	118959696	118959754	0.16100	0.00147	0.07379	included	HepG2	NCBP2
A3SS	B4GALT4	ENSG00000121578.8	chr3	-	118942904	118943125			118942904	118943092	118945655	118945888	0.13400	0.00448	0.02624	longer	K562	AQR

Showing 1 to 9 of 9 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

B4GALT4

General Information

Functions

Localization

Domains (AlphaFold: B4GALT4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for B4GALT4 is not avaliable on ENCORE database.

3 proteins are bound to B4GALT4 RNA:

eCLIP assay for B4GALT4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for B4GALT4 is not available on ENCORE database.

63 RBPs can affect the gene expression of B4GALT4 :

The Knockdown/knockout RNA-Seq assay for B4GALT4 is not available on ENCORE database.

7 RBPs can affect the splicing of B4GALT4 :

The Knockdown/knockout RNA-Seq assay for B4GALT4 is not avaliable on ENCORE database.