NR5A2

General Information

Gene Name       : NR5A2
Gene ID             : ENSG00000116833.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NR5A2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NR5A2ENSG00000116833.130.170.100.14ENCSR000AEF
HepG2NR5A2ENSG00000116833.130.110.120.11ENCSR985KAT
K562NR5A2ENSG00000116833.130.250.220.23ENCSR000AEO

Assays

2 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq NR5A2-BGRSLV02-RS293NR5A2Ribo-STAMP-293TReleased   shRNAKD% = ,
knockdown followed by RNA-seq NR5A2-BGRSLV03-RS293NR5A2Ribo-STAMP-293TReleased   shRNAKD% = ,






  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
NR5A2Ribo-STAMP-293TshRNANR5A2-BGRSLV02-25,NR5A2-BGRSLV02-26NT-BGRSLV02-1,NT-BGRSLV02-2,ReleasedENCORE2
NR5A2Ribo-STAMP-293TshRNANR5A2-BGRSLV03-39,NR5A2-BGRSLV03-40NT-BGRSLV03-1,NT-BGRSLV03-2,ReleasedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NR5A2 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on NR5A2 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for NR5A2 is not avaliable on ENCORE database.






NO known proteins are bound to NR5A2 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for NR5A2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NR5A2 is not available on ENCORE database.

  • 55 RBPs can affect the levels of NR5A2.  








The Knockdown/knockout RNA-Seq assay for NR5A2 is not available on ENCORE database.





55 RBPs can affect the gene expression of NR5A2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NR5A2ENSG00000116833.939.3784011.517801.773403.091202.26150HepG2ASCC1
NR5A2ENSG00000116833.946.8208014.192901.721903.043101.57080HepG2ATP5C1
NR5A2ENSG00000116833.958.958009.797002.589208.229707.20080HepG2CKAP4
NR5A2ENSG00000116833.951.012303.493703.867908.775707.44010HepG2CNOT7
NR5A2ENSG00000116833.947.1420013.083801.849104.157403.40000HepG2CELF1
NR5A2ENSG00000116833.946.393708.025702.531105.931704.29560HepG2DDX1
NR5A2ENSG00000116833.947.5686010.433302.188704.812103.94420HepG2DDX21
NR5A2ENSG00000116833.9160.5779013.335003.5899017.8773016.43240HepG2DDX3X
NR5A2ENSG00000116833.940.193409.370802.100604.115903.32200HepG2DKC1
NR5A2ENSG00000116833.929.767807.791101.933803.330502.62750HepG2DNAJC2
NR5A2ENSG00000116833.967.1509011.012102.608207.884506.91880HepG2EIF2S1
NR5A2ENSG00000116833.929.125308.025201.859602.280801.45220HepG2EIF3D
NR5A2ENSG00000116833.999.4903012.170803.0310013.7613012.35640HepG2EIF4A3
NR5A2ENSG00000116833.983.7000011.847802.820509.218608.00240HepG2EIF4B
NR5A2ENSG00000116833.991.7295024.946601.878404.685103.36980HepG2FTO
NR5A2ENSG00000116833.9104.3230028.230501.885607.346306.33350HepG2GPKOW
NR5A2ENSG00000116833.985.510407.947403.4274013.2594012.01580HepG2HNRNPA1
NR5A2ENSG00000116833.963.214108.836202.838607.779406.66410HepG2HNRNPC
NR5A2ENSG00000116833.986.2042026.940901.677905.479904.62460HepG2HNRNPLL
NR5A2ENSG00000116833.933.7083010.958401.621002.490601.58510HepG2HNRNPM
NR5A2ENSG00000116833.930.6288011.578301.403401.898101.32880HepG2IGF2BP2
NR5A2ENSG00000116833.955.5985012.280602.178605.390804.48340HepG2MAGOH
NR5A2ENSG00000116833.967.5002012.641202.416707.111406.11830HepG2NCBP2
NR5A2ENSG00000116833.942.7473011.260001.924503.881303.03740HepG2PABPC4
NR5A2ENSG00000116833.935.943705.962702.591605.153604.36630HepG2PCBP1
NR5A2ENSG00000116833.947.536309.859402.269404.916603.87380HepG2PRPF8
NR5A2ENSG00000116833.987.032006.068203.8421012.9686011.95810HepG2PTBP1
NR5A2ENSG00000116833.9107.4274013.322903.0113015.5726014.31280HepG2PUF60
NR5A2ENSG00000116833.949.9571014.139501.820904.447303.73490HepG2PUM1
NR5A2ENSG00000116833.9134.240509.975603.7502026.3765024.83320HepG2PUS1
NR5A2ENSG00000116833.937.047306.569902.495304.510403.74030HepG2QKI
NR5A2ENSG00000116833.926.220706.752501.957102.415601.90410HepG2NELFE
NR5A2ENSG00000116833.946.488809.754202.252704.679603.68810HepG2RRP9
NR5A2ENSG00000116833.931.707007.835202.016703.042802.05490HepG2SERBP1
NR5A2ENSG00000116833.990.2928040.933201.141203.485202.72460HepG2SF3A3
NR5A2ENSG00000116833.974.8504026.666101.488904.311403.44860HepG2SF3B1
NR5A2ENSG00000116833.979.646706.593303.5944013.2502012.38160HepG2SRSF1
NR5A2ENSG00000116833.957.3263024.649101.217602.922602.39930HepG2SSB
NR5A2ENSG00000116833.945.0234010.724302.069703.674302.60170HepG2SUPT6H
NR5A2ENSG00000116833.966.217108.604902.9439010.827909.82140HepG2TRIM56
NR5A2ENSG00000116833.941.6175013.587201.614802.495201.89670HepG2U2AF1
NR5A2ENSG00000116833.967.9824036.301500.905002.310201.66320HepG2UPF1
NR5A2ENSG00000116833.97.8472024.79340-1.659702.147701.54470HepG2ZC3H8
NR5A2ENSG00000116833.95.6073044.68650-2.994505.930905.12860K562AQR
NR5A2ENSG00000116833.971.6668033.325301.104602.952401.62610K562CIRBP
NR5A2ENSG00000116833.910.4353036.95450-1.824303.550402.65540K562EIF3G
NR5A2ENSG00000116833.918.4222055.29750-1.585803.590802.52220K562EIF4G2
NR5A2ENSG00000116833.96.1292024.82820-2.018202.466401.75060K562GRSF1
NR5A2ENSG00000116833.964.8938032.615400.992402.487101.61610K562MATR3
NR5A2ENSG00000116833.94.1061019.09380-2.217302.246401.51400K562MTPAP
NR5A2ENSG00000116833.97.9418033.44920-2.074403.085401.77380K562PABPC1
NR5A2ENSG00000116833.937.1688011.739401.662603.138801.47030K562PKM
NR5A2ENSG00000116833.912.2921031.74630-1.368902.211901.60760K562PTBP1
NR5A2ENSG00000116833.938.910509.196802.080904.222902.99460K562RCC2
NR5A2ENSG00000116833.979.2003032.046301.305204.252402.86330K562NELFE
NR5A2ENSG00000116833.989.8943024.966701.848104.658201.85270K562DROSHA
NR5A2ENSG00000116833.94.6755019.24540-2.041302.199901.41970K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NR5A2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of NR5A2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for NR5A2 is not avaliable on ENCORE database.