NR5A2

General Information

Gene Name : NR5A2
Gene ID : ENSG00000116833.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NR5A2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NR5A2	ENSG00000116833.13	0.17	0.10	0.14	ENCSR000AEF
HepG2	NR5A2	ENSG00000116833.13	0.11	0.12	0.11	ENCSR985KAT
K562	NR5A2	ENSG00000116833.13	0.25	0.22	0.23	ENCSR000AEO

Assays

2 Released experiments are available on ENCORE database.

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Linked Antibody	Controls	Method	Note
knockdown followed by RNA-seq	NR5A2-BGRSLV02-RS293		NR5A2	Ribo-STAMP-293T	Released			shRNA	KD% = ,
knockdown followed by RNA-seq	NR5A2-BGRSLV03-RS293		NR5A2	Ribo-STAMP-293T	Released			shRNA	KD% = ,

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project	Note
NR5A2	Ribo-STAMP-293T	shRNA			NR5A2-BGRSLV02-25,NR5A2-BGRSLV02-26	NT-BGRSLV02-1,NT-BGRSLV02-2	,	Released	ENCORE2
NR5A2	Ribo-STAMP-293T	shRNA			NR5A2-BGRSLV03-39,NR5A2-BGRSLV03-40	NT-BGRSLV03-1,NT-BGRSLV03-2	,	Released	ENCORE2

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary

RNA Targets

eCLIP assay for NR5A2 is not avaliable on ENCORE database.

Proteins bound to RNA

NO known proteins bind on NR5A2 RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for NR5A2 is not avaliable on ENCORE database.

NO known proteins are bound to NR5A2 RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for NR5A2 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for NR5A2 is not available on ENCORE database.
55 RBPs can affect the levels of NR5A2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NR5A2 is not available on ENCORE database.

55 RBPs can affect the gene expression of NR5A2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NR5A2	ENSG00000116833.9	134.24050	9.97560	3.75020	26.37650	24.83320	HepG2	PUS1
NR5A2	ENSG00000116833.9	160.57790	13.33500	3.58990	17.87730	16.43240	HepG2	DDX3X
NR5A2	ENSG00000116833.9	107.42740	13.32290	3.01130	15.57260	14.31280	HepG2	PUF60
NR5A2	ENSG00000116833.9	79.64670	6.59330	3.59440	13.25020	12.38160	HepG2	SRSF1
NR5A2	ENSG00000116833.9	99.49030	12.17080	3.03100	13.76130	12.35640	HepG2	EIF4A3
NR5A2	ENSG00000116833.9	85.51040	7.94740	3.42740	13.25940	12.01580	HepG2	HNRNPA1
NR5A2	ENSG00000116833.9	87.03200	6.06820	3.84210	12.96860	11.95810	HepG2	PTBP1
NR5A2	ENSG00000116833.9	66.21710	8.60490	2.94390	10.82790	9.82140	HepG2	TRIM56
NR5A2	ENSG00000116833.9	83.70000	11.84780	2.82050	9.21860	8.00240	HepG2	EIF4B
NR5A2	ENSG00000116833.9	51.01230	3.49370	3.86790	8.77570	7.44010	HepG2	CNOT7
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 57 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NR5A2

General Information

Functions

Localization

Domains (AlphaFold: NR5A2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NR5A2 is not avaliable on ENCORE database.

NO known proteins are bound to NR5A2 RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for NR5A2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NR5A2 is not available on ENCORE database.

55 RBPs can affect the gene expression of NR5A2 :

The Knockdown/knockout RNA-Seq assay for NR5A2 is not available on ENCORE database.

No RBPs affect the alternative splcing events of NR5A2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for NR5A2 is not avaliable on ENCORE database.