USP44

General Information

Gene Name       : USP44
Gene ID             : ENSG00000136014.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: USP44)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878USP44ENSG00000136014.110.000.000.00ENCSR000AEF
HepG2USP44ENSG00000136014.110.090.090.09ENCSR985KAT
K562USP44ENSG00000136014.112.081.871.98ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
USP44Ribo-STAMP-293TshRNAUSP44-BGRSLV04-63,USP44-BGRSLV04-64NT-BGRSLV04-1,NT-BGRSLV04-2,SubmittedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for USP44 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on USP44 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for USP44 is not avaliable on ENCORE database.






NO known proteins are bound to USP44 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for USP44 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for USP44 is not available on ENCORE database.

  • 30 RBPs can affect the levels of USP44.  








The Knockdown/knockout RNA-Seq assay for USP44 is not available on ENCORE database.





30 RBPs can affect the gene expression of USP44 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
USP44ENSG00000136014.760.195604.208303.838209.254308.34440HepG2AKAP1
USP44ENSG00000136014.726.728104.030602.729203.454802.76540HepG2DDX3X
USP44ENSG00000136014.722.111203.463902.674202.964202.32700HepG2DDX6
USP44ENSG00000136014.723.686003.582002.725102.906302.20190HepG2EIF4B
USP44ENSG00000136014.731.283903.285603.251102.409001.49900HepG2IGF2BP3
USP44ENSG00000136014.726.297405.341402.299503.152002.43590HepG2PUM2
USP44ENSG00000136014.755.178108.173002.755107.781607.01440HepG2RBM22
USP44ENSG00000136014.714.474102.197802.719302.043901.62030HepG2SRSF1
USP44ENSG00000136014.747.07180127.93650-1.442506.827105.99350K562AGGF1
USP44ENSG00000136014.782.85760140.57010-0.762603.049202.00360K562AKAP8
USP44ENSG00000136014.754.75000133.12060-1.281805.909004.93070K562AKAP8L
USP44ENSG00000136014.732.23670106.03160-1.717706.218205.39840K562AQR
USP44ENSG00000136014.718.8012053.56610-1.510503.282902.33100K562BOP1
USP44ENSG00000136014.722.8246058.18160-1.350002.902201.96810K562EFTUD2
USP44ENSG00000136014.7128.3614067.649600.924003.882303.05310K562EIF2S2
USP44ENSG00000136014.7175.8995089.206900.979404.459103.45440K562HSPD1
USP44ENSG00000136014.777.33470141.28530-0.869403.762302.77980K562KIF1C
USP44ENSG00000136014.792.57110158.27370-0.773803.218202.22440K562MBNL1
USP44ENSG00000136014.776.84540144.58630-0.911903.288502.05150K562MSI2
USP44ENSG00000136014.781.91550148.35290-0.856803.090701.50850K562NOL12
USP44ENSG00000136014.752.33240111.38490-1.089803.041401.74010K562PABPC1
USP44ENSG00000136014.745.8911076.02790-0.728301.879701.31350K562PTBP1
USP44ENSG00000136014.791.09870147.99980-0.700102.294101.55120K562PUF60
USP44ENSG00000136014.735.37910132.04170-1.900009.698308.73020K562PUS1
USP44ENSG00000136014.748.62640128.63600-1.403506.618205.72700K562RBM15
USP44ENSG00000136014.738.7104086.39280-1.158202.916002.08140K562SF3A3
USP44ENSG00000136014.733.0067068.51130-1.053602.247901.47910K562SF3B4
USP44ENSG00000136014.775.9004032.627701.217903.632702.69270K562SYNCRIP
USP44ENSG00000136014.726.9705076.99450-1.513404.146802.66750K562UTP3
USP44ENSG00000136014.771.24590119.46080-0.745702.600501.76890K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for USP44 is not available on ENCORE database.






No RBPs affect the alternative splcing events of USP44 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for USP44 is not avaliable on ENCORE database.