TNFRSF8

General Information

Gene Name : TNFRSF8
Gene ID : ENSG00000120949.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TNFRSF8)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TNFRSF8	ENSG00000120949.14	7.82	33.78	20.80	ENCSR000AEF
HepG2	TNFRSF8	ENSG00000120949.14	0.00	0.00	0.00	ENCSR985KAT
K562	TNFRSF8	ENSG00000120949.14	17.64	15.07	16.36	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TNFRSF8 is not avaliable on ENCORE database.

Proteins bound to RNA

TNFRSF8 RNA is bound by 4 proteins.

CanvasJS.com

eCLIP assay for TNFRSF8 is not avaliable on ENCORE database.

4 proteins are bound to TNFRSF8 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	12150674	12150740	+	intron-Distal	5.77114	22.33763	K562	AGGF1
chr1	12150370	12150462	+	intron-Distal	6.33368	17.85441	K562	AGGF1
chr1	12150598	12150629	+	intron-Distal	5.11864	15.94588	K562	AGGF1
chr1	12186475	12186560	+	intron-Distal	4.15659	5.99968	K562	PRPF8
chr1	12147243	12147281	+	intron-Distal	3.82615	4.47419	K562	AGGF1
chr1	12186454	12186596	+	intron-Distal	4.76169	4.39969	K562	TARDBP
chr1	12150657	12150773	+	intron-Distal	4.08961	3.69238	K562	GTF2F1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 7 of 7 entries

eCLIP assay for TNFRSF8 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TNFRSF8 is not available on ENCORE database.
60 RBPs can affect the levels of TNFRSF8.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TNFRSF8 is not available on ENCORE database.

60 RBPs can affect the gene expression of TNFRSF8 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TNFRSF8	ENSG00000120949.10	620.98990	231.92870	1.42080	23.65110	20.97490	K562	MAGOH
TNFRSF8	ENSG00000120949.10	599.34120	225.35130	1.41110	16.94070	15.35900	K562	PTBP1
TNFRSF8	ENSG00000120949.10	215.81970	520.18670	-1.26920	15.85260	14.50570	K562	HNRNPC
TNFRSF8	ENSG00000120949.10	336.35500	744.43040	-1.14620	14.61050	13.40120	K562	PUS1
TNFRSF8	ENSG00000120949.10	644.22370	358.62180	0.84500	11.33250	10.19540	K562	FXR1
TNFRSF8	ENSG00000120949.10	402.98300	750.52940	-0.89720	11.16430	9.73280	K562	AKAP8L
TNFRSF8	ENSG00000120949.10	430.82320	725.24310	-0.75140	9.59390	8.51310	K562	RBM15
TNFRSF8	ENSG00000120949.10	206.11790	451.90840	-1.13260	10.65770	8.27740	K562	FKBP4
TNFRSF8	ENSG00000120949.10	19.38080	96.16160	-2.31080	9.70050	8.22040	K562	G3BP2
TNFRSF8	ENSG00000120949.10	317.11460	591.70920	-0.89990	9.56550	7.88430	K562	FIP1L1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 60 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TNFRSF8 is not available on ENCORE database.

1 RBPs can affect the splicing of TNFRSF8 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	TNFRSF8	ENSG00000120949.10	chr1	+	12132216	12132299			12123526	12123718	12144520	12144608	0.15800	0.00021	0.04078	included	K562	DROSHA

Showing 1 to 1 of 1 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TNFRSF8

General Information

Functions

Localization

Domains (AlphaFold: TNFRSF8)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TNFRSF8 is not avaliable on ENCORE database.

4 proteins are bound to TNFRSF8 RNA:

eCLIP assay for TNFRSF8 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TNFRSF8 is not available on ENCORE database.

60 RBPs can affect the gene expression of TNFRSF8 :

The Knockdown/knockout RNA-Seq assay for TNFRSF8 is not available on ENCORE database.

1 RBPs can affect the splicing of TNFRSF8 :

The Knockdown/knockout RNA-Seq assay for TNFRSF8 is not avaliable on ENCORE database.