SSTR5-AS1

General Information

Gene Name       : SSTR5-AS1
Gene ID             : ENSG00000261713.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SSTR5-AS1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SSTR5-AS1ENSG00000261713.60.000.000.00ENCSR000AEF
HepG2SSTR5-AS1ENSG00000261713.61.200.210.70ENCSR985KAT
K562SSTR5-AS1ENSG00000261713.60.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SSTR5-AS1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SSTR5-AS1 RNA is bound by 7 proteins.  







eCLIP assay for SSTR5-AS1 is not avaliable on ENCORE database.





7 proteins are bound to SSTR5-AS1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1611226481122703-intron-Distal5.574044.61649HepG2CSTF2T
chr1611235891123656-intron-Distal,intron-Proximal4.969104.14880HepG2CSTF2T
chr1611256481125719-intron-Distal3.877073.23492HepG2BCCIP
chr1611227931122855-intron-Distal5.413293.87340HepG2CSTF2T
chr1611257981125870-intron-Distal6.064845.11753HepG2CSTF2T
chr1611226091122648-intron-Distal5.098383.40229HepG2CSTF2T
chr1611256111125723-intron-Distal5.7706110.15405HepG2CSTF2T
chr1611235991123645-intron-Distal,intron-Proximal4.113853.48466HepG2SLTM
chr1611252311125317-intron-Distal4.749975.36249HepG2CSTF2T
chr1611255341125611-intron-Distal5.964845.11753HepG2CSTF2T
chr1611213621121475-intron-Distal3.238128.10159HepG2HNRNPK
chr1611247151124819-intron-Distal3.404803.37567HepG2HNRNPK
chr1611256331125718-intron-Distal3.964415.72412HepG2FAM120A
chr1611243361124394-intron-Distal4.732644.35339HepG2CSTF2T
chr1611265401126636-intron-Distal4.734844.61288HepG2PRPF4
chr1611228941122981-intron-Distal6.023116.08348HepG2CSTF2T
chr1611229811123051-intron-Distal,intron-Proximal5.685365.60609HepG2CSTF2T
chr1611257661125855-intron-Distal4.473533.63122HepG2PRPF4
chr1611270421127096-intron-Distal4.247833.00221HepG2CSTF2T
chr1611223331122384-intron-Distal5.011853.40229HepG2CSTF2T
chr1611257951125864-intron-Distal5.4719410.61528HepG2FAM120A
chr1611254241125467-intron-Distal4.134243.59099HepG2FASTKD2
chr1611283671128433-intron-Distal4.369335.65212HepG2SLTM
chr1611250281125087-intron-Distal5.129084.84557HepG2CSTF2T
chr1611252351125315-intron-Distal4.171514.58231HepG2HNRNPK
chr1611272471127313-intron-Distal5.446844.10339HepG2CSTF2T
chr1611265261126642-intron-Distal5.352949.82247HepG2CSTF2T
chr1611265411126633-intron-Distal3.558244.17288HepG2FASTKD2
chr1611256531125730-intron-Distal4.741924.35952HepG2PRPF4
chr1611286171128669-intron-Distal5.310015.22630HepG2SLTM
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SSTR5-AS1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SSTR5-AS1 is not available on ENCORE database.

  • 45 RBPs can affect the levels of SSTR5-AS1.  








The Knockdown/knockout RNA-Seq assay for SSTR5-AS1 is not available on ENCORE database.





45 RBPs can affect the gene expression of SSTR5-AS1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SSTR5-AS1ENSG00000261713.2115.5304033.148701.801108.308107.33900HepG2BOP1
SSTR5-AS1ENSG00000261713.242.9672011.428901.910504.248103.45770HepG2CKAP4
SSTR5-AS1ENSG00000261713.281.3076013.959302.542108.271606.96500HepG2CNOT7
SSTR5-AS1ENSG00000261713.2396.2148030.432703.7025049.6270047.27400HepG2CPSF6
SSTR5-AS1ENSG00000261713.271.8225028.080501.354803.070701.70980HepG2DDX47
SSTR5-AS1ENSG00000261713.255.8291012.033502.213906.156804.70660HepG2DDX5
SSTR5-AS1ENSG00000261713.216.470901.390303.566303.041001.88240HepG2EFTUD2
SSTR5-AS1ENSG00000261713.249.362106.380202.951607.199106.16780HepG2EIF4A3
SSTR5-AS1ENSG00000261713.221.611803.222602.745403.405901.56500HepG2FMR1
SSTR5-AS1ENSG00000261713.231.061905.969302.379403.850903.07070HepG2G3BP1
SSTR5-AS1ENSG00000261713.2157.5941034.498702.1915012.7219011.44360HepG2GPKOW
SSTR5-AS1ENSG00000261713.254.9433010.914302.331607.292605.80030HepG2HDGF
SSTR5-AS1ENSG00000261713.263.086202.601104.6000012.5030011.12260HepG2HNRNPC
SSTR5-AS1ENSG00000261713.293.1117040.786201.190803.267502.49300HepG2HNRNPF
SSTR5-AS1ENSG00000261713.2101.6291040.162601.339305.443004.46210HepG2IGF2BP1
SSTR5-AS1ENSG00000261713.222.979506.068801.920802.187101.57860HepG2IGF2BP2
SSTR5-AS1ENSG00000261713.244.056205.691002.952502.386101.48110HepG2IGF2BP3
SSTR5-AS1ENSG00000261713.230.6005010.450201.549902.481901.51600HepG2KIF1C
SSTR5-AS1ENSG00000261713.2144.6216016.076103.1692013.4438011.64830HepG2LARP4
SSTR5-AS1ENSG00000261713.285.358906.433903.7297014.4819013.03280HepG2MAGOH
SSTR5-AS1ENSG00000261713.2118.109406.470804.1899010.033308.88870HepG2MATR3
SSTR5-AS1ENSG00000261713.235.074104.084703.102003.654602.38600HepG2NONO
SSTR5-AS1ENSG00000261713.225.883705.902602.132502.870102.13570HepG2PABPC4
SSTR5-AS1ENSG00000261713.221.078402.559003.042003.645002.68640HepG2PARN
SSTR5-AS1ENSG00000261713.214.755401.118303.721803.098001.79400HepG2PKM
SSTR5-AS1ENSG00000261713.227.296705.217702.387103.178302.59990HepG2PTBP1
SSTR5-AS1ENSG00000261713.227.752503.260003.089604.882404.11790HepG2PUF60
SSTR5-AS1ENSG00000261713.227.938605.655202.304503.021202.37360HepG2QKI
SSTR5-AS1ENSG00000261713.2170.1861043.939001.9534013.0484011.76290HepG2RPLP0
SSTR5-AS1ENSG00000261713.241.740501.314404.988909.369408.31760HepG2RPS19
SSTR5-AS1ENSG00000261713.228.062803.891402.850203.682002.76250HepG2RPS2
SSTR5-AS1ENSG00000261713.277.9638014.018002.475408.551207.17110HepG2RPS3A
SSTR5-AS1ENSG00000261713.250.567405.435903.217507.772306.86070HepG2SF3B4
SSTR5-AS1ENSG00000261713.213.863002.685302.368001.875901.32870HepG2SMN1
SSTR5-AS1ENSG00000261713.216.4992039.21250-1.248902.291901.82200HepG2SRFBP1
SSTR5-AS1ENSG00000261713.229.362505.672502.371803.215902.71610HepG2SRSF1
SSTR5-AS1ENSG00000261713.251.907703.219204.0111012.1150010.93200HepG2SRSF5
SSTR5-AS1ENSG00000261713.2235.4617040.071602.5547025.9095024.19900HepG2SRSF7
SSTR5-AS1ENSG00000261713.262.759304.613603.7658013.5017012.44630HepG2SRSF9
SSTR5-AS1ENSG00000261713.247.7296010.229702.222004.566903.01690HepG2STAU1
SSTR5-AS1ENSG00000261713.2203.144302.514706.3359053.7762052.09910HepG2TIAL1
SSTR5-AS1ENSG00000261713.224.912303.185502.967204.156103.05930HepG2TUFM
SSTR5-AS1ENSG00000261713.237.756503.372203.484805.463004.26410HepG2UBE2L3
SSTR5-AS1ENSG00000261713.240.1391012.556001.676503.308602.10050HepG2XPO5
SSTR5-AS1ENSG00000261713.266.5455016.335202.026306.772805.79750HepG2ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SSTR5-AS1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SSTR5-AS1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SSTR5-AS1 is not avaliable on ENCORE database.