RBM11

General Information

Gene Name : RBM11
Gene ID : ENSG00000185272.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RBM11)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RBM11	ENSG00000185272.13	0.00	0.24	0.12	ENCSR000AEF
HepG2	RBM11	ENSG00000185272.13	0.20	0.07	0.14	ENCSR985KAT
K562	RBM11	ENSG00000185272.13	2.27	2.66	2.46	ENCSR000AEO

Assays

1 Released experiments are available on ENCORE database.

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Linked Antibody	Controls	Method	Note
RNA Bind-n-Seq	RBNS: RBM11		RBM11	cell-free sample	Released

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

GeneName	Cell_Line	Method	Sample_reps	Control_reps	KD%	Status	Project
RBM11	293T	shRNA	BG293LV01-37,BG293LV01-38	BG293LV01-1,BG293LV01-2		NotSatisfied	ENCORE2
RBM11	293T	shRNA	BG293LV01-39,BG293LV01-40	BG293LV01-1,BG293LV01-2		NotSatisfied	ENCORE2
RBM11	293T	shRNA	BG293LV01-41,BG293LV01-42	BG293LV01-1,BG293LV01-2		NotSatisfied	ENCORE2
RBM11	293T	shRNA	BG293LV04-51,BG293LV04-52	BG293LV04-1,BG293LV04-2		NotSatisfied	ENCORE2
RBM11	293T	shRNA	RBM11-BG293LV04-53,RBM11-BG293LV04-54	NT-BG293LV04-1,NT-BG293LV04-2	,	Submitting	ENCORE2
RBM11	293T	shRNA	RBM11-BG293LV06-45,RBM11-BG293LV06-46	NT-BG293LV06-1,NT-BG293LV06-2	,	Sequenced	ENCORE2

RNA Bind-n-Seqn

GeneName	gene_aliases	Status	Project	Note
RBM11	RBM11		Released	ENCODE4

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary

RNA Targets

eCLIP assay for RBM11 is not avaliable on ENCORE database.

The binding motifs of RBM11

Proteins bound to RNA

NO known proteins bind on RBM11 RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for RBM11 is not avaliable on ENCORE database.

NO known proteins are bound to RBM11 RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for RBM11 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for RBM11 is not available on ENCORE database.
3 RBPs can affect the levels of RBM11.

The Knockdown/knockout RNA-Seq assay for RBM11 is not available on ENCORE database.

3 RBPs can affect the gene expression of RBM11 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RBM11	ENSG00000185272.9	43.87890	2.46010	4.15660	6.20730	5.44700	HepG2	AKAP1
RBM11	ENSG00000185272.9	23.96630	2.35820	3.34510	3.90120	3.16970	HepG2	DDX3X
RBM11	ENSG00000185272.9	59.14770	26.85700	1.13890	2.36780	1.61480	K562	RPS19
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RBM11

General Information

Functions

Localization

Domains (AlphaFold: RBM11)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RBM11 is not avaliable on ENCORE database.

NO known proteins are bound to RBM11 RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for RBM11 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RBM11 is not available on ENCORE database.

3 RBPs can affect the gene expression of RBM11 :

The Knockdown/knockout RNA-Seq assay for RBM11 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RBM11 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RBM11 is not avaliable on ENCORE database.