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RBM11
shRNA
in 293T
Batch: BG293LV06
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BG293LV06-45
BG293LV06-46
idx
0
0
TRCN#_or_BGC#
TRCN0000162312
TRCN0000162312
shRNA_or_gRNA_sequence
CCGGCCCAGCTCATATAAATGGACTCTCGAGAGTCCATTTATATGAGCTGGGTTTTTTG
CCGGCCCAGCTCATATAAATGGACTCTCGAGAGTCCATTTATATGAGCTGGGTTTTTTG
PAM
Name
RBM11
RBM11
Sample_ID
BG293LV06-45
BG293LV06-46
transduction_Date
9/5/24
9/5/24
days
D4
D4
RBP_name
RBM11
RBM11
qPCR_result
58.3
48.7
Ave_qPCR
53.5
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
0
0
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
10132
10133
Western Blot
Western Blot info was not avaliable
Experiment Status
BG293LV06-45
BG293LV06-46
Sample_ID
BG293LV06-45
BG293LV06-46
Sample Name
Sample Name
RBM11-BG293LV06-45
RBM11-BG293LV06-46
RBP
RBM11
RBM11
Cell_Line
293T
293T
Exp UID
Status
Sequenced
Sequenced
Status_date
2024-10-16
2024-10-16
Project
ENCORE2
ENCORE2
Note
ID
13482
13483
Library-Prep
Sequencing
Library-Prep Information
BG293LV06-45
BG293LV06-46
Sample #
47
48
Sample Name
RBM11-BG293LV06-45
RBM11-BG293LV06-46
Sample_Name_Alias
Index Well Position
G06
H06
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2024-09-25
2024-09-25
Lib_ID
Lib-240925B
Lib-240925B
Tecan_Location
Tecan
Tecan_date
Size_bp
276
278
Peak_Molarity
88.30
66.10
libSampleQC_DNA_Well
DNA_Library_set71/set1/G6.png
DNA_Library_set71/set1/H6.png
RIN
10.0
10.0
libSample_RNA_Well
RNA_Library_set71/set1/G6.png
RNA_Library_set71/set1/H6.png
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2024-09-30
2024-09-30
Sample_ID
BG293LV06-45
BG293LV06-46
RBP
RBM11
RBM11
Batch_ID
BG293LV06
BG293LV06
WB_result
0.000
0.000
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4472
4473
Sequencing Information
BG293LV06-45
BG293LV06-46
Sample_ID
BG293LV06-45
BG293LV06-46
Sample Name
RBM11-BG293LV06-45
RBM11-BG293LV06-46
Pool ID
Pool-240930
Pool-240930
LocalServer_folder
set71
set71
total_reads
41,444,201
36,434,660
total_aligned_reads
38,279,222
33,456,321
unique_aligned_reads
35,793,616
31,293,967
percent_uniqueAligned
0.86366
0.85891
correlation_replicates
0.995960
0.995960
spikein_reads
84,210
109,972
percent_spikeins
0.00203
0.00302
original_ReadLength
101
101
QC_Status
ReadyToSubmit
ReadyToSubmit
ID
3041
3042
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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