OLFM2

General Information

Gene Name       : OLFM2
Gene ID             : ENSG00000105088.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: OLFM2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878OLFM2ENSG00000105088.80.000.050.03ENCSR000AEF
HepG2OLFM2ENSG00000105088.80.210.140.17ENCSR985KAT
K562OLFM2ENSG00000105088.80.320.070.20ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for OLFM2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • OLFM2 RNA is bound by 1 proteins.  







eCLIP assay for OLFM2 is not avaliable on ENCORE database.





1 proteins are bound to OLFM2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1999828509982861-intron-Distal5.439588.26155K562NSUN2
chr1999828399982850-intron-Distal5.439588.26155K562NSUN2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for OLFM2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for OLFM2 is not available on ENCORE database.

  • 26 RBPs can affect the levels of OLFM2.  








The Knockdown/knockout RNA-Seq assay for OLFM2 is not available on ENCORE database.





26 RBPs can affect the gene expression of OLFM2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
OLFM2ENSG00000105088.421.275705.459901.962201.782601.34580HepG2AKAP1
OLFM2ENSG00000105088.448.2967011.485002.072105.153804.13540HepG2AKAP8L
OLFM2ENSG00000105088.425.678804.518002.506702.669501.89860HepG2ASCC1
OLFM2ENSG00000105088.42.6578013.63820-2.359302.234001.42630HepG2BCLAF1
OLFM2ENSG00000105088.467.2867015.689602.100406.372805.36220HepG2CPSF6
OLFM2ENSG00000105088.425.957006.419502.015502.511401.45400HepG2EFTUD2
OLFM2ENSG00000105088.418.101504.319902.067001.891601.39050HepG2EIF2S1
OLFM2ENSG00000105088.425.074904.467902.488503.340102.61400HepG2G3BP1
OLFM2ENSG00000105088.424.680405.566102.148502.821301.91390HepG2GEMIN5
OLFM2ENSG00000105088.49.1387034.26940-1.906903.160402.39720HepG2HNRNPF
OLFM2ENSG00000105088.410.4092033.74680-1.696902.608701.90550HepG2IGF2BP1
OLFM2ENSG00000105088.453.0752015.861001.742503.873902.28300HepG2ILF3
OLFM2ENSG00000105088.477.457704.843803.9991013.1700011.86800HepG2MATR3
OLFM2ENSG00000105088.423.305602.321503.327404.040803.40720HepG2PTBP1
OLFM2ENSG00000105088.497.3146015.398202.6598012.5436011.17640HepG2PUM2
OLFM2ENSG00000105088.462.9490015.471402.024505.664304.98980HepG2RBM22
OLFM2ENSG00000105088.428.981202.584803.486904.764004.08910HepG2NELFE
OLFM2ENSG00000105088.414.340702.405302.575701.896401.37290HepG2RECQL
OLFM2ENSG00000105088.458.300906.084703.260208.262807.26710HepG2RPS19
OLFM2ENSG00000105088.418.517602.419402.936102.737702.14890HepG2SF3B4
OLFM2ENSG00000105088.41.4547018.69490-3.683903.177702.33870HepG2SNRNP70
OLFM2ENSG00000105088.432.657609.395501.797302.679302.11820K562AGGF1
OLFM2ENSG00000105088.41.4217011.18530-2.975901.936601.41280K562FXR1
OLFM2ENSG00000105088.425.576707.679901.735602.171301.50210K562NSUN2
OLFM2ENSG00000105088.431.574107.755902.025303.122002.13450K562SRPK2
OLFM2ENSG00000105088.44.0214017.31170-2.106002.035301.33090K562SYNCRIP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for OLFM2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of OLFM2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for OLFM2 is not avaliable on ENCORE database.