MCAT

General Information

Gene Name       : MCAT
Gene ID             : ENSG00000100294.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MCAT)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MCATENSG00000100294.123.358.085.71ENCSR000AEF
HepG2MCATENSG00000100294.129.7010.219.96ENCSR985KAT
K562MCATENSG00000100294.1210.8210.0910.46ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MCAT is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on MCAT RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for MCAT is not avaliable on ENCORE database.






NO known proteins are bound to MCAT RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for MCAT is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MCAT is not available on ENCORE database.

  • 46 RBPs can affect the levels of MCAT.  








The Knockdown/knockout RNA-Seq assay for MCAT is not available on ENCORE database.





46 RBPs can affect the gene expression of MCAT :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MCATENSG00000100294.8149.64390105.061300.510201.867901.35030HepG2ACO1
MCATENSG00000100294.8302.60460151.390300.999105.620604.89380HepG2AKAP1
MCATENSG00000100294.8152.74650105.554900.533001.984201.32020HepG2AKAP8L
MCATENSG00000100294.874.66270138.16830-0.888003.081302.36080HepG2CPSF6
MCATENSG00000100294.8155.1706097.166600.675203.250602.35310HepG2DDX19B
MCATENSG00000100294.886.67450156.89880-0.856202.592401.64790HepG2DDX59
MCATENSG00000100294.875.33130119.75120-0.668701.867501.36880HepG2EIF2S1
MCATENSG00000100294.8200.05950102.663600.962405.459004.28360HepG2EWSR1
MCATENSG00000100294.852.9498098.48560-0.895302.747901.60750HepG2FASTKD2
MCATENSG00000100294.867.21850138.39610-1.041902.465601.51090HepG2FTO
MCATENSG00000100294.858.71410123.86590-1.077004.084903.28510HepG2G3BP1
MCATENSG00000100294.8126.10310188.81830-0.582402.695201.98690HepG2HNRNPF
MCATENSG00000100294.8163.89850109.545500.581202.186501.34110HepG2HNRNPM
MCATENSG00000100294.8302.54700169.023900.839804.445203.38440HepG2LARP4
MCATENSG00000100294.8203.87570133.587300.609802.273301.67640HepG2MAGOH
MCATENSG00000100294.8408.15600134.331101.6032015.3190013.92670HepG2MATR3
MCATENSG00000100294.878.93170152.42420-0.949402.860401.87430HepG2MTPAP
MCATENSG00000100294.8222.50330137.492200.694402.934302.28340HepG2NCBP2
MCATENSG00000100294.8122.09300188.39770-0.625802.764202.00040HepG2NOL12
MCATENSG00000100294.871.02530132.53390-0.900003.005002.22600HepG2NSUN2
MCATENSG00000100294.8286.46140190.918000.585304.078703.38860HepG2PUM1
MCATENSG00000100294.890.74870148.54440-0.710902.552601.94890HepG2QKI
MCATENSG00000100294.8133.5536068.490100.963403.721403.01910HepG2RPS19
MCATENSG00000100294.8172.70600122.598500.494301.950101.39440HepG2SMN1
MCATENSG00000100294.879.41040164.63170-1.051803.735202.82230HepG2SNRNP70
MCATENSG00000100294.889.72720222.55110-1.3105010.168409.37220HepG2SRFBP1
MCATENSG00000100294.8216.91820149.061100.541102.491202.03620HepG2SRSF1
MCATENSG00000100294.8120.83820177.57610-0.555402.237401.66730HepG2SRSF5
MCATENSG00000100294.8114.74880185.50960-0.693003.603802.82510HepG2SRSF7
MCATENSG00000100294.880.15850134.00400-0.741302.662502.11150HepG2TAF15
MCATENSG00000100294.8159.5263084.585600.915202.631401.58710HepG2TBRG4
MCATENSG00000100294.8204.06260114.706800.831004.509203.90320HepG2TIAL1
MCATENSG00000100294.8207.26940120.034400.788004.374003.64860HepG2UTP3
MCATENSG00000100294.8411.47060268.502400.615804.205102.62320K562APOBEC3C
MCATENSG00000100294.8205.1711077.612001.4024010.507209.41420K562FXR1
MCATENSG00000100294.853.97250126.36180-1.227303.472902.06190K562HNRNPA2B1
MCATENSG00000100294.8197.63940131.469600.588002.213501.38430K562HNRNPM
MCATENSG00000100294.8174.3500093.262800.902504.786703.67370K562MAGOH
MCATENSG00000100294.8165.9655093.070200.834404.060102.92630K562MATR3
MCATENSG00000100294.8141.50270204.05720-0.528102.395901.64250K562MTPAP
MCATENSG00000100294.8132.71300226.75810-0.772803.841502.97780K562NSUN2
MCATENSG00000100294.8224.4206090.612301.3083010.599009.35780K562PTBP1
MCATENSG00000100294.8145.9452086.874300.748303.040902.15480K562RBM22
MCATENSG00000100294.860.76180136.04140-1.162803.085501.43630K562RBM39
MCATENSG00000100294.890.2875032.190301.487803.947802.72330K562RPS3
MCATENSG00000100294.8133.53610223.70440-0.744404.321103.31900K562SF3A3
MCATENSG00000100294.852.72820116.12300-1.139002.924001.64970K562SNRNP200
MCATENSG00000100294.8170.4234088.832800.939904.524703.62410K562SRSF1
MCATENSG00000100294.859.53370138.92770-1.222603.413601.76770K562SUPT6H
MCATENSG00000100294.8156.1210089.899200.796203.339502.56040K562TARDBP
MCATENSG00000100294.8110.36130205.73590-0.898604.711303.55520K562WDR3
MCATENSG00000100294.855.05330136.68680-1.312003.781401.80170K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MCAT is not available on ENCORE database.





4 RBPs can affect the splicing of MCAT :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMCATENSG00000100294.8chr22-435330864353330443528211435294924353716743537255-0.396000.003350.05453excludedK562SF3B4
SEMCATENSG00000100294.8chr22-435330864353330443528211435294924353716743537255-0.452000.000060.00551excludedHepG2SFPQ
SEMCATENSG00000100294.8chr22-435330864353330443528211435294924353716743537255-0.410000.002670.05036excludedK562U2AF1
SEMCATENSG00000100294.8chr22-435330864353330443528211435294924353716743537255-0.276000.003350.05086excludedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MCAT is not avaliable on ENCORE database.