HIST2H2AC

General Information

Gene Name : HIST2H2AC
Gene ID : ENSG00000184260.5
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: HIST2H2AC)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	HIST2H2AC	ENSG00000184260.5	0.00	0.10	0.05	ENCSR000AEF
HepG2	HIST2H2AC	ENSG00000184260.5	7.92	1.30	4.61	ENCSR985KAT
K562	HIST2H2AC	ENSG00000184260.5	0.46	0.19	0.33	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for HIST2H2AC is not avaliable on ENCORE database.

Proteins bound to RNA

HIST2H2AC RNA is bound by 9 proteins.

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eCLIP assay for HIST2H2AC is not avaliable on ENCORE database.

9 proteins are bound to HIST2H2AC RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	149858822	149858828	+	CDS	5.38860	400.00000	K562	YBX3
chr1	149858828	149858847	+	CDS	5.65459	400.00000	K562	YBX3
chr1	149858847	149858849	+	CDS	5.68187	400.00000	K562	YBX3
chr1	149858569	149858641	+	CDS	5.21836	400.00000	K562	RPS3
chr1	149858862	149858873	+	CDS	5.69610	400.00000	K562	YBX3
chr1	149858849	149858862	+	CDS	5.67455	400.00000	K562	YBX3
chr1	149858907	149858959	+	3'-UTR,CDS	10.94894	174.14159	K562	SLBP
chr1	149858527	149858567	+	CDS	6.80391	86.43575	HepG2	SUB1
chr1	149858804	149858821	+	CDS	4.47833	43.76873	K562	YBX3
chr1	149858874	149858877	+	CDS	5.01783	35.33708	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 21 entries

eCLIP assay for HIST2H2AC is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for HIST2H2AC is not available on ENCORE database.
4 RBPs can affect the levels of HIST2H2AC.

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The Knockdown/knockout RNA-Seq assay for HIST2H2AC is not available on ENCORE database.

4 RBPs can affect the gene expression of HIST2H2AC :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
HIST2H2AC	ENSG00000184260.4	0.75080	11.52910	-3.94070	2.31190	1.84040	HepG2	SRFBP1
HIST2H2AC	ENSG00000184260.4	11.22730	35.43860	-1.65830	2.65140	1.83830	HepG2	LARP4
HIST2H2AC	ENSG00000184260.4	0.44140	9.54060	-4.43410	1.89040	1.37380	HepG2	RPS19
HIST2H2AC	ENSG00000184260.4	0.57800	9.66770	-4.06390	1.99010	1.36280	HepG2	TARDBP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 4 of 4 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

HIST2H2AC

General Information

Functions

Localization

Domains (AlphaFold: HIST2H2AC)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for HIST2H2AC is not avaliable on ENCORE database.

9 proteins are bound to HIST2H2AC RNA:

eCLIP assay for HIST2H2AC is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for HIST2H2AC is not available on ENCORE database.

4 RBPs can affect the gene expression of HIST2H2AC :

The Knockdown/knockout RNA-Seq assay for HIST2H2AC is not available on ENCORE database.

No RBPs affect the alternative splcing events of HIST2H2AC on ENCORE database.

The Knockdown/knockout RNA-Seq assay for HIST2H2AC is not avaliable on ENCORE database.