CD33

General Information

Gene Name : CD33
Gene ID : ENSG00000105383.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CD33)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CD33	ENSG00000105383.14	0.74	0.39	0.56	ENCSR000AEF
HepG2	CD33	ENSG00000105383.14	0.00	0.04	0.02	ENCSR985KAT
K562	CD33	ENSG00000105383.14	37.93	40.37	39.15	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CD33 is not avaliable on ENCORE database.

Proteins bound to RNA

CD33 RNA is bound by 4 proteins.

CanvasJS.com

eCLIP assay for CD33 is not avaliable on ENCORE database.

4 proteins are bound to CD33 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	51729074	51729290	+	CDS	3.95509	4.95875	K562	IGF2BP2
chr19	51738931	51738982	+	CDS,intron-Proximal	5.10331	4.86944	K562	AQR
chr19	51729152	51729227	+	CDS	3.22061	4.29172	K562	YBX3
chr19	51740896	51740996	+	intron-Distal	3.90489	3.50894	K562	SAFB2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 4 of 4 entries

eCLIP assay for CD33 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CD33 is not available on ENCORE database.
77 RBPs can affect the levels of CD33.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CD33 is not available on ENCORE database.

77 RBPs can affect the gene expression of CD33 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CD33	ENSG00000105383.10	1221.08620	428.53920	1.51060	42.41680	40.27470	K562	EIF2S2
CD33	ENSG00000105383.10	133.23910	2.57290	5.69440	28.88740	27.56510	HepG2	RBM22
CD33	ENSG00000105383.10	140.45830	3.71180	5.24180	25.87420	24.43800	HepG2	AKAP1
CD33	ENSG00000105383.10	1331.42690	682.87940	0.96320	25.50850	23.59770	K562	UPF1
CD33	ENSG00000105383.10	261.11440	634.77190	-1.28160	22.90850	21.28450	K562	FXR1
CD33	ENSG00000105383.10	51.63080	0.00000	99999.99990	16.30170	14.97320	HepG2	CKAP4
CD33	ENSG00000105383.10	303.07700	664.00340	-1.13150	17.24420	14.86580	K562	MATR3
CD33	ENSG00000105383.10	452.46690	827.38270	-0.87070	15.62660	14.19250	K562	DDX47
CD33	ENSG00000105383.10	192.79630	526.09600	-1.44820	15.41810	12.69380	K562	EEF2
CD33	ENSG00000105383.10	325.80740	607.58600	-0.89910	14.38760	12.65320	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 81 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CD33 is not available on ENCORE database.

17 RBPs can affect the splicing of CD33 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CD33	ENSG00000105383.10	chr19	+	51728473	51728854			51728353	51728411	51729058	51729337	-0.35800	0.00000	0.00000	excluded	K562	SRSF1
SE	CD33	ENSG00000105383.10	chr19	+	51728473	51728854			51728353	51728411	51729058	51729337	0.26400	0.00000	0.00160	included	K562	LARP4
SE	CD33	ENSG00000105383.10	chr19	+	51728473	51728854			51728353	51728411	51729058	51729337	-0.38100	0.00000	0.00006	excluded	K562	HNRNPC
SE	CD33	ENSG00000105383.10	chr19	+	51742327	51742559			51738785	51738931	51742772	51743270	0.10800	0.00002	0.00163	included	K562	PRPF8
SE	CD33	ENSG00000105383.10	chr19	+	51728473	51728854			51728353	51728411	51729058	51729337	0.17600	0.00002	0.00117	included	K562	RBM15
MXE	CD33	ENSG00000105383.10	chr19	+	51729058	51729337	51738785	51738931	51728319	51728411	51742772	51743197	0.30200	0.00003	0.00293	1included	K562	LIN28B
SE	CD33	ENSG00000105383.10	chr19	+	51728726	51728854			51728319	51728411	51729058	51729337	-0.17400	0.00006	0.01440	excluded	K562	ZC3H8
SE	CD33	ENSG00000105383.10	chr19	+	51728473	51728854			51728353	51728411	51729058	51729337	0.31200	0.00011	0.00300	included	K562	U2AF2
SE	CD33	ENSG00000105383.10	chr19	+	51728473	51728854			51728353	51728411	51729058	51729337	-0.18400	0.00017	0.04156	excluded	K562	APOBEC3C
SE	CD33	ENSG00000105383.10	chr19	+	51728473	51728854			51728353	51728411	51729058	51729337	-0.17300	0.00030	0.02956	excluded	K562	SUPV3L1

Showing 1 to 10 of 17 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CD33

General Information

Functions

Localization

Domains (AlphaFold: CD33)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CD33 is not avaliable on ENCORE database.

4 proteins are bound to CD33 RNA:

eCLIP assay for CD33 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CD33 is not available on ENCORE database.

77 RBPs can affect the gene expression of CD33 :

The Knockdown/knockout RNA-Seq assay for CD33 is not available on ENCORE database.

17 RBPs can affect the splicing of CD33 :

The Knockdown/knockout RNA-Seq assay for CD33 is not avaliable on ENCORE database.