C2CD3

General Information

Gene Name : C2CD3
Gene ID : ENSG00000168014.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: C2CD3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	C2CD3	ENSG00000168014.16	8.45	14.53	11.49	ENCSR000AEF
HepG2	C2CD3	ENSG00000168014.16	10.80	8.50	9.65	ENCSR985KAT
K562	C2CD3	ENSG00000168014.16	13.54	13.56	13.55	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for C2CD3 is not avaliable on ENCORE database.

Proteins bound to RNA

C2CD3 RNA is bound by 4 proteins.

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eCLIP assay for C2CD3 is not avaliable on ENCORE database.

4 proteins are bound to C2CD3 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	73849718	73849796	-	CDS,intron-Distal,intron-Proximal	5.78452	6.35567	HepG2	PRPF8
chr11	73812722	73812788	-	intron-Distal	4.23212	3.42734	K562	PTBP1
chr11	73843251	73843259	-	intron-Distal	7.01805	32.18148	K562	NSUN2
chr11	73843259	73843274	-	intron-Distal	7.01805	32.18148	K562	NSUN2
chr11	73843629	73843802	-	intron-Distal,intron-Proximal	3.52452	8.15069	HepG2	QKI
chr11	73844838	73844919	-	intron-Distal	3.95255	3.05187	HepG2	QKI
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for C2CD3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for C2CD3 is not available on ENCORE database.
63 RBPs can affect the levels of C2CD3.

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The Knockdown/knockout RNA-Seq assay for C2CD3 is not available on ENCORE database.

63 RBPs can affect the gene expression of C2CD3 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
C2CD3	ENSG00000168014.12	569.06260	423.46860	0.42620	3.82830	3.13430	HepG2	ACO1
C2CD3	ENSG00000168014.12	635.38580	333.25230	0.93090	7.64120	6.80300	HepG2	AKAP1
C2CD3	ENSG00000168014.12	307.51320	423.42450	-0.46150	3.62100	2.87770	HepG2	CKAP4
C2CD3	ENSG00000168014.12	194.39300	453.45040	-1.22200	12.22950	10.90090	HepG2	CPSF6
C2CD3	ENSG00000168014.12	327.67620	487.93750	-0.57440	3.97230	2.76870	HepG2	DDX5
C2CD3	ENSG00000168014.12	296.06900	418.93110	-0.50080	3.08970	2.05890	HepG2	DHX30
C2CD3	ENSG00000168014.12	298.24740	434.35470	-0.54240	4.23020	3.37610	HepG2	DNAJC21
C2CD3	ENSG00000168014.12	341.00150	485.40210	-0.50940	3.20190	2.32910	HepG2	EIF4G2
C2CD3	ENSG00000168014.12	552.92950	673.45500	-0.28450	1.92680	1.40580	HepG2	ETF1
C2CD3	ENSG00000168014.12	268.64100	454.22600	-0.75770	2.57360	1.59720	HepG2	FTO
C2CD3	ENSG00000168014.12	528.97480	293.94580	0.84750	7.00470	5.93770	HepG2	FXR1
C2CD3	ENSG00000168014.12	388.97660	272.67040	0.51240	2.62210	1.97380	HepG2	G3BP1
C2CD3	ENSG00000168014.12	482.78420	628.04730	-0.37950	2.66340	1.95860	HepG2	HNRNPF
C2CD3	ENSG00000168014.12	326.41360	490.54190	-0.58770	3.72440	3.00380	HepG2	HNRNPLL
C2CD3	ENSG00000168014.12	367.54680	484.53810	-0.39870	3.08930	2.45110	HepG2	HNRNPU
C2CD3	ENSG00000168014.12	446.44090	618.45060	-0.47020	3.75110	2.91850	HepG2	IGF2BP1
C2CD3	ENSG00000168014.12	417.85800	294.04850	0.50690	2.64770	2.00620	HepG2	MAGOH
C2CD3	ENSG00000168014.12	476.70400	295.69200	0.68890	4.25170	3.48560	HepG2	MATR3
C2CD3	ENSG00000168014.12	256.11550	434.95770	-0.76410	5.21340	4.20010	HepG2	NSUN2
C2CD3	ENSG00000168014.12	396.32150	255.20920	0.63490	5.35760	4.55830	HepG2	PCBP1
C2CD3	ENSG00000168014.12	279.90650	432.17020	-0.62670	5.44190	4.43870	HepG2	PPIL4
C2CD3	ENSG00000168014.12	404.55040	508.06070	-0.32870	2.17980	1.48610	HepG2	PRPF4
C2CD3	ENSG00000168014.12	648.92690	454.99810	0.51210	2.48520	1.32600	HepG2	PRPF6
C2CD3	ENSG00000168014.12	518.24960	259.69170	0.99670	13.32460	12.30340	HepG2	PTBP1
C2CD3	ENSG00000168014.12	300.77200	486.17480	-0.69280	5.63700	4.82560	HepG2	PUF60
C2CD3	ENSG00000168014.12	625.94880	516.09600	0.27830	2.27180	1.72390	HepG2	PUM1
C2CD3	ENSG00000168014.12	657.90760	289.00630	1.18670	19.44610	18.26520	HepG2	NELFE
C2CD3	ENSG00000168014.12	412.97800	269.18030	0.61740	4.94060	4.14750	HepG2	RECQL
C2CD3	ENSG00000168014.12	525.32680	676.51050	-0.36490	2.18020	1.56490	HepG2	RPLP0
C2CD3	ENSG00000168014.12	290.43810	431.50560	-0.57110	5.01980	4.19730	HepG2	SAFB2
C2CD3	ENSG00000168014.12	777.93930	547.88930	0.50570	2.41100	1.78270	HepG2	SF3A3
C2CD3	ENSG00000168014.12	435.88720	270.36050	0.68900	6.02240	5.20690	HepG2	SF3B4
C2CD3	ENSG00000168014.12	872.39640	635.74500	0.45640	5.30260	4.67070	HepG2	SRFBP1
C2CD3	ENSG00000168014.12	544.57310	282.20270	0.94830	11.98120	11.14540	HepG2	SRSF1
C2CD3	ENSG00000168014.12	623.63290	480.02670	0.37750	3.13320	2.47280	HepG2	SRSF5
C2CD3	ENSG00000168014.12	463.03040	617.02410	-0.41420	3.49710	2.72780	HepG2	SRSF7
C2CD3	ENSG00000168014.12	317.12810	229.59120	0.46590	2.94690	2.38110	HepG2	SRSF9
C2CD3	ENSG00000168014.12	241.39280	389.21480	-0.68920	3.60860	2.21080	HepG2	STAU1
C2CD3	ENSG00000168014.12	753.91550	545.92270	0.46560	5.34920	4.53560	HepG2	SUCLG1
C2CD3	ENSG00000168014.12	381.82190	253.66860	0.58990	4.37040	3.68990	HepG2	TAF15
C2CD3	ENSG00000168014.12	331.12580	478.12080	-0.53000	3.32380	2.53710	HepG2	TARDBP
C2CD3	ENSG00000168014.12	301.13190	470.83880	-0.64480	5.57840	4.91650	HepG2	TIAL1
C2CD3	ENSG00000168014.12	334.18990	475.02680	-0.50730	4.43080	3.75140	HepG2	TRIM56
C2CD3	ENSG00000168014.12	178.55400	250.07540	-0.48600	2.01130	1.36420	HepG2	UCHL5
C2CD3	ENSG00000168014.12	757.81530	469.11140	0.69180	9.80090	8.78480	HepG2	UTP3
C2CD3	ENSG00000168014.12	299.60960	416.71890	-0.47600	2.23310	1.57610	HepG2	XRN2
C2CD3	ENSG00000168014.12	442.65640	534.39030	-0.27170	1.89230	1.41680	HepG2	ZNF622
C2CD3	ENSG00000168014.12	621.19480	817.83620	-0.39680	3.00390	1.96810	K562	AKAP8
C2CD3	ENSG00000168014.12	602.80060	774.46950	-0.36150	2.47200	1.85400	K562	AKAP8L
C2CD3	ENSG00000168014.12	1310.47400	1050.01110	0.31960	2.81980	1.56950	K562	APOBEC3C
C2CD3	ENSG00000168014.12	1358.64920	925.54010	0.55370	5.97930	5.17290	K562	AQR
C2CD3	ENSG00000168014.12	625.62850	812.58720	-0.37720	3.42140	2.39680	K562	ATP5C1
C2CD3	ENSG00000168014.12	605.91720	847.02860	-0.48330	4.02850	2.99210	K562	FIP1L1
C2CD3	ENSG00000168014.12	683.22000	452.41860	0.59460	6.64940	5.76890	K562	FXR1
C2CD3	ENSG00000168014.12	777.15890	1096.37110	-0.49650	4.64450	3.66580	K562	GRSF1
C2CD3	ENSG00000168014.12	677.17630	542.38090	0.32010	1.94560	1.43380	K562	HNRNPC
C2CD3	ENSG00000168014.12	851.56150	1148.42930	-0.43150	3.63570	2.72790	K562	HSPD1
C2CD3	ENSG00000168014.12	608.62760	821.93850	-0.43350	3.74920	2.76960	K562	KIF1C
C2CD3	ENSG00000168014.12	704.93800	544.34770	0.37290	2.67320	1.84780	K562	MAGOH
C2CD3	ENSG00000168014.12	1355.48620	922.58120	0.55500	4.91260	3.80530	K562	PCBP3
C2CD3	ENSG00000168014.12	1073.22510	707.65590	0.60070	7.56890	6.26960	K562	POLR2G
C2CD3	ENSG00000168014.12	698.91780	961.50570	-0.46020	3.79100	2.80930	K562	PPIG
C2CD3	ENSG00000168014.12	691.63320	528.89240	0.38690	2.94280	2.26060	K562	PTBP1
C2CD3	ENSG00000168014.12	546.18370	748.36970	-0.45440	4.17300	3.46070	K562	RBM15
C2CD3	ENSG00000168014.12	1147.83660	863.33050	0.41080	5.72380	4.43880	K562	SRPK2
C2CD3	ENSG00000168014.12	833.33490	1042.61650	-0.32320	2.32650	1.54640	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for C2CD3 is not available on ENCORE database.

4 RBPs can affect the splicing of C2CD3 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	C2CD3	ENSG00000168014.12	chr11	-	73872443	73872601	73850649	73850873	73879388	73879658	0.15800	0.00042	0.05023	included	K562	FMR1
SE	C2CD3	ENSG00000168014.12	chr11	-	73872443	73872601	73850649	73850873	73879388	73879658	-0.29000	0.00000	0.00004	excluded	K562	AQR
SE	C2CD3	ENSG00000168014.12	chr11	-	73872443	73872601	73850649	73850873	73879388	73879658	-0.25800	0.00238	0.06001	excluded	HepG2	SF3A3
SE	C2CD3	ENSG00000168014.12	chr11	-	73872443	73872601	73850649	73850873	73879388	73879658	-0.19000	0.00099	0.03391	excluded	K562	UTP18
A3SS	C2CD3	ENSG00000168014.12	chr11	-	73843888	73844102	73843888	73844017	73844469	73844602	0.23700	0.00000	0.00000	longer	K562	AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

C2CD3

General Information

Functions

Localization

Domains (AlphaFold: C2CD3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for C2CD3 is not avaliable on ENCORE database.

4 proteins are bound to C2CD3 RNA:

eCLIP assay for C2CD3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for C2CD3 is not available on ENCORE database.

63 RBPs can affect the gene expression of C2CD3 :

The Knockdown/knockout RNA-Seq assay for C2CD3 is not available on ENCORE database.

4 RBPs can affect the splicing of C2CD3 :

The Knockdown/knockout RNA-Seq assay for C2CD3 is not avaliable on ENCORE database.