RP11-456K23.1

General Information

Gene Name : RP11-456K23.1
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-456K23.1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-456K23.1 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-456K23.1 RNA is bound by 7 proteins.

eCLIP assay for RP11-456K23.1 is not avaliable on ENCORE database.

7 proteins are bound to RP11-456K23.1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr18	42259155	42259160	-	intron-Distal	5.00279	4.86986	HepG2	FXR2
chr18	42259155	42259160	-	intron-Distal	3.93501	3.95682	K562	PUM1
chr18	42259155	42259182	-	intron-Distal	6.38608	12.87580	K562	CPEB4
chr18	42259162	42259182	-	intron-Distal	4.00279	4.14811	HepG2	FXR2
chr18	42259160	42259183	-	intron-Distal	5.59919	6.88959	HepG2	SDAD1
chr18	42259163	42259183	-	intron-Distal	3.93501	3.95682	K562	PUM1
chr18	42259155	42259160	-	intron-Distal	4.47902	4.74293	HepG2	ZNF800
chr18	42259155	42259160	-	intron-Distal	6.01915	5.78809	K562	GEMIN5
chr18	42259160	42259183	-	intron-Distal	4.47902	4.74293	HepG2	ZNF800
chr18	42259160	42259182	-	intron-Distal	6.01915	5.78809	K562	GEMIN5
chr18	42259154	42259167	-	intron-Distal	5.49602	10.45894	HepG2	G3BP1
chr18	42259155	42259160	-	intron-Distal	5.59919	6.88959	HepG2	SDAD1
chr18	42259167	42259182	-	intron-Distal	5.49602	10.45894	HepG2	G3BP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-456K23.1 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for RP11-456K23.1 is not available on ENCORE database.
2 RBPs can affect the levels of RP11-456K23.1.

The Knockdown/knockout RNA-Seq assay for RP11-456K23.1 is not available on ENCORE database.

2 RBPs can affect the gene expression of RP11-456K23.1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-456K23.1	ENSG00000267414.1	11.51790	0.95600	3.59060	2.16580	1.63370	HepG2	EIF2S1
RP11-456K23.1	ENSG00000267414.1	12.91820	1.86160	2.79470	2.20870	1.57350	HepG2	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-456K23.1

General Information

Functions

Localization

Domains (AlphaFold: RP11-456K23.1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-456K23.1 is not avaliable on ENCORE database.

7 proteins are bound to RP11-456K23.1 RNA:

eCLIP assay for RP11-456K23.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-456K23.1 is not available on ENCORE database.

2 RBPs can affect the gene expression of RP11-456K23.1 :

The Knockdown/knockout RNA-Seq assay for RP11-456K23.1 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP11-456K23.1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-456K23.1 is not avaliable on ENCORE database.