RP11-385J1.2

General Information

Gene Name : RP11-385J1.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-385J1.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-385J1.2 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-385J1.2 RNA is bound by 6 proteins.

eCLIP assay for RP11-385J1.2 is not avaliable on ENCORE database.

6 proteins are bound to RP11-385J1.2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	178546655	178546728	-	intron-Distal	3.77506	3.37809	K562	HNRNPL
chr3	178521106	178521212	-	intron-Distal	4.86629	11.02443	K562	PTBP1
chr3	178510751	178510816	-	intron-Distal	4.10188	4.27460	K562	HNRNPM
chr3	178481145	178481264	-	intron-Distal	4.08924	6.11515	K562	PTBP1
chr3	178507112	178507172	-	intron-Distal	4.42193	3.53404	K562	HNRNPM
chr3	178480394	178480523	-	intron-Distal	4.64008	4.30178	K562	PTBP1
chr3	178532364	178532496	-	intron-Distal	3.83147	3.65589	K562	SAFB2
chr3	178546569	178546655	-	intron-Distal	3.80137	3.14791	K562	HNRNPL
chr3	178473991	178474090	-	intron-Distal	3.61639	9.04757	K562	HNRNPL
chr3	178575710	178575877	-	intron-Distal	3.73262	3.14791	K562	HNRNPL
chr3	178507036	178507112	-	intron-Distal	4.29997	3.78162	K562	HNRNPM
chr3	178496216	178496322	-	intron-Distal	3.89337	8.92437	K562	EIF4G2
chr3	178505140	178505274	-	intron-Distal	3.07052	3.11628	K562	KHSRP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-385J1.2 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for RP11-385J1.2 is not available on ENCORE database.
3 RBPs can affect the levels of RP11-385J1.2.

The Knockdown/knockout RNA-Seq assay for RP11-385J1.2 is not available on ENCORE database.

3 RBPs can affect the gene expression of RP11-385J1.2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-385J1.2	ENSG00000237978.1	8.18650	0.53960	3.92330	1.82660	1.38270	HepG2	RBM22
RP11-385J1.2	ENSG00000237978.1	6.83350	0.00000	99999.99990	1.99000	1.39960	HepG2	RPLP0
RP11-385J1.2	ENSG00000237978.1	83.46760	43.12170	0.95270	2.31480	1.80890	K562	PUS1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-385J1.2

General Information

Functions

Localization

Domains (AlphaFold: RP11-385J1.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-385J1.2 is not avaliable on ENCORE database.

6 proteins are bound to RP11-385J1.2 RNA:

eCLIP assay for RP11-385J1.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-385J1.2 is not available on ENCORE database.

3 RBPs can affect the gene expression of RP11-385J1.2 :

The Knockdown/knockout RNA-Seq assay for RP11-385J1.2 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP11-385J1.2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-385J1.2 is not avaliable on ENCORE database.