HIST1H4K

General Information

Gene Name       : HIST1H4K
Gene ID             : ENSG00000273542.1
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: HIST1H4K)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HIST1H4KENSG00000273542.10.000.000.00ENCSR000AEF
HepG2HIST1H4KENSG00000273542.10.002.631.31ENCSR985KAT
K562HIST1H4KENSG00000273542.10.000.510.26ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HIST1H4K is not avaliable on ENCORE database.



Proteins bound to RNA

  • HIST1H4K RNA is bound by 3 proteins.  







eCLIP assay for HIST1H4K is not avaliable on ENCORE database.





3 proteins are bound to HIST1H4K RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr62779895427799004-3'-UTR,CDS3.449173.84295HepG2LSM11
chr62779895227799006-3'-UTR,CDS11.26278400.00000K562SLBP
chr62779895327799018-3'-UTR,CDS5.2245321.28743K562RPS3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HIST1H4K is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HIST1H4K is not available on ENCORE database.

  • 6 RBPs can affect the levels of HIST1H4K.  








The Knockdown/knockout RNA-Seq assay for HIST1H4K is not available on ENCORE database.





6 RBPs can affect the gene expression of HIST1H4K :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HIST1H4KENSG00000197914.218.193204.242502.100302.081501.42390K562NSUN2
HIST1H4KENSG00000197914.220.491403.176602.689402.690101.87100K562PCBP3
HIST1H4KENSG00000197914.214.703602.435402.593802.118301.41810K562POLR2G
HIST1H4KENSG00000197914.26.977800.0000099999.999902.001201.38900K562SRSF1
HIST1H4KENSG00000197914.212.882000.0000099999.999902.195701.47360K562TIA1
HIST1H4KENSG00000197914.222.750003.849102.563203.394402.42820K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HIST1H4K is not available on ENCORE database.






No RBPs affect the alternative splcing events of HIST1H4K on ENCORE database.





The Knockdown/knockout RNA-Seq assay for HIST1H4K is not avaliable on ENCORE database.