HIST1H1D

General Information

Gene Name       : HIST1H1D
Gene ID             : ENSG00000124575.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HIST1H1D)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HIST1H1DENSG00000124575.60.570.310.44ENCSR000AEF
HepG2HIST1H1DENSG00000124575.60.000.000.00ENCSR985KAT
K562HIST1H1DENSG00000124575.61.031.961.50ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HIST1H1D is not avaliable on ENCORE database.



Proteins bound to RNA
  • HIST1H1D RNA is bound by 8 proteins.  







eCLIP assay for HIST1H1D is not avaliable on ENCORE database.





8 proteins are bound to HIST1H1D RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr62623444326234499-3'-UTR6.4274617.78581HepG2SUB1
chr62623444026234469-3'-UTR9.43002102.90126K562SLBP
chr62623446926234511-3'-UTR,CDS7.0688431.58518K562SLBP
chr62623509726235185-5'-UTR,CDS4.580589.23992K562GEMIN5
chr62623513026235201-5'-UTR,CDS3.1040311.37228HepG2SUB1
chr62623464626234702-CDS4.0907321.94558K562ZNF622
chr62623501126235030-CDS3.036547.11500K562YBX3
chr62623460026234693-CDS3.1749214.20334K562UCHL5
chr62623500126235033-CDS3.750345.79184K562RPS3
chr62623494626234958-CDS3.2891410.26447K562YBX3
chr62623506726235133-CDS5.028414.14433K562ZNF800
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HIST1H1D is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HIST1H1D is not available on ENCORE database.

  • 8 RBPs can affect the levels of HIST1H1D.  








The Knockdown/knockout RNA-Seq assay for HIST1H1D is not available on ENCORE database.





8 RBPs can affect the gene expression of HIST1H1D :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HIST1H1DENSG00000124575.515.6834043.46140-1.470502.889802.22400K562DDX47
HIST1H1DENSG00000124575.557.7502019.897601.537103.528302.06760K562EEF2
HIST1H1DENSG00000124575.517.9648065.20560-1.859804.429703.25330K562EIF4G2
HIST1H1DENSG00000124575.5109.7709034.095501.686708.118406.59340K562HNRNPU
HIST1H1DENSG00000124575.512.3879033.14750-1.420002.073701.30320K562MBNL1
HIST1H1DENSG00000124575.560.6028027.633801.132802.474701.55220K562PCBP2
HIST1H1DENSG00000124575.567.8118030.183001.167703.378602.65310K562PTBP1
HIST1H1DENSG00000124575.526.8736075.62980-1.492803.388402.20240K562PUM1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HIST1H1D is not available on ENCORE database.






No RBPs affect the alternative splcing events of HIST1H1D on ENCORE database.





The Knockdown/knockout RNA-Seq assay for HIST1H1D is not avaliable on ENCORE database.