CTD-2054N24.2

General Information

Gene Name : CTD-2054N24.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CTD-2054N24.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CTD-2054N24.2 is not avaliable on ENCORE database.

Proteins bound to RNA

CTD-2054N24.2 RNA is bound by 5 proteins.

eCLIP assay for CTD-2054N24.2 is not avaliable on ENCORE database.

5 proteins are bound to CTD-2054N24.2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	100357675	100357769	+	intron-Distal	3.74932	3.06005	HepG2	QKI
chr15	100361991	100362046	+	intron-Distal	3.99077	3.84389	HepG2	SUGP2
chr15	100379425	100379490	+	intron-Distal	3.74302	3.30829	HepG2	CSTF2
chr15	100386669	100386763	+	intron-Distal	3.14707	4.70908	HepG2	QKI
chr15	100386550	100386669	+	intron-Distal	5.21545	9.49897	HepG2	QKI
chr15	100412867	100412979	+	intron-Distal	4.16730	3.97888	HepG2	HNRNPL
chr15	100414268	100414320	+	intron-Distal	4.40886	3.35169	HepG2	U2AF2
chr15	100389918	100389965	+	intron-Distal	3.88841	4.77135	HepG2	HNRNPL
chr15	100361692	100361813	+	intron-Distal	3.93098	6.25586	HepG2	SUGP2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for CTD-2054N24.2 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for CTD-2054N24.2 is not available on ENCORE database.
4 RBPs can affect the levels of CTD-2054N24.2.

The Knockdown/knockout RNA-Seq assay for CTD-2054N24.2 is not available on ENCORE database.

4 RBPs can affect the gene expression of CTD-2054N24.2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CTD-2054N24.2	ENSG00000259363.1	68.62330	33.95680	1.01490	2.18130	1.64750	HepG2	EIF2S1
CTD-2054N24.2	ENSG00000259363.1	14.91620	37.23950	-1.32000	2.38700	1.76180	HepG2	SF3A3
CTD-2054N24.2	ENSG00000259363.1	18.61100	43.68290	-1.23090	2.37120	1.88870	HepG2	SSB
CTD-2054N24.2	ENSG00000259363.1	14.53900	36.32200	-1.32090	2.32460	1.81050	HepG2	ZNF622
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CTD-2054N24.2

General Information

Functions

Localization

Domains (AlphaFold: CTD-2054N24.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CTD-2054N24.2 is not avaliable on ENCORE database.

5 proteins are bound to CTD-2054N24.2 RNA:

eCLIP assay for CTD-2054N24.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CTD-2054N24.2 is not available on ENCORE database.

4 RBPs can affect the gene expression of CTD-2054N24.2 :

The Knockdown/knockout RNA-Seq assay for CTD-2054N24.2 is not available on ENCORE database.

No RBPs affect the alternative splcing events of CTD-2054N24.2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for CTD-2054N24.2 is not avaliable on ENCORE database.