CMTM1

General Information

Gene Name       : CMTM1
Gene ID             : ENSG00000089505.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CMTM1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CMTM1ENSG00000089505.170.000.060.03ENCSR000AEF
HepG2CMTM1ENSG00000089505.171.180.140.66ENCSR985KAT
K562CMTM1ENSG00000089505.170.670.170.42ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CMTM1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on CMTM1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CMTM1 is not avaliable on ENCORE database.






NO known proteins are bound to CMTM1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CMTM1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CMTM1 is not available on ENCORE database.

  • 7 RBPs can affect the levels of CMTM1.  








The Knockdown/knockout RNA-Seq assay for CMTM1 is not available on ENCORE database.





7 RBPs can affect the gene expression of CMTM1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CMTM1ENSG00000089505.1332.972309.844801.743702.516001.92560HepG2DDX6
CMTM1ENSG00000089505.1320.2347058.65890-1.535503.406902.70220HepG2GPKOW
CMTM1ENSG00000089505.1320.556704.767702.108102.561001.97750HepG2HNRNPU
CMTM1ENSG00000089505.1334.396106.847602.328503.569201.93740HepG2NOLC1
CMTM1ENSG00000089505.1314.9503061.65030-2.043904.824203.77900HepG2SNRNP70
CMTM1ENSG00000089505.1341.8335010.729101.963004.196203.33790K562EIF2S2
CMTM1ENSG00000089505.1364.2739024.304001.402903.758102.93240K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CMTM1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CMTM1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CMTM1 is not avaliable on ENCORE database.