GDNF

General Information

Gene Name       : GDNF
Gene ID             : ENSG00000168621.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GDNF)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GDNFENSG00000168621.140.000.000.00ENCSR000AEF
HepG2GDNFENSG00000168621.140.040.040.04ENCSR985KAT
K562GDNFENSG00000168621.140.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GDNF is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on GDNF RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for GDNF is not avaliable on ENCORE database.






NO known proteins are bound to GDNF RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for GDNF is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GDNF is not available on ENCORE database.

  • 67 RBPs can affect the levels of GDNF.  








The Knockdown/knockout RNA-Seq assay for GDNF is not available on ENCORE database.





67 RBPs can affect the gene expression of GDNF :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GDNFENSG00000168621.10228.0968038.108502.5814029.0237027.54850HepG2ACO1
GDNFENSG00000168621.1051.158904.791003.416507.117806.30810HepG2AKAP1
GDNFENSG00000168621.10104.2284038.284401.444806.349605.23240HepG2AKAP8L
GDNFENSG00000168621.1017.2139057.66090-1.744004.880004.01010HepG2AUH
GDNFENSG00000168621.1032.2649085.28320-1.402304.135103.42000HepG2BOP1
GDNFENSG00000168621.1040.2700091.32260-1.181303.199402.37320HepG2CNOT7
GDNFENSG00000168621.10185.8926078.299501.247305.593904.64800HepG2CPSF6
GDNFENSG00000168621.1066.0125027.973601.238602.730701.63220HepG2CPSF7
GDNFENSG00000168621.1038.445408.796602.127702.833201.53290HepG2DDX27
GDNFENSG00000168621.1047.88770134.17530-1.486407.352805.34960HepG2DDX47
GDNFENSG00000168621.1081.717803.944604.3726015.7555014.44230HepG2DDX6
GDNFENSG00000168621.107.4618025.32160-1.762802.343301.68970HepG2DNAJC21
GDNFENSG00000168621.1055.2886012.589102.134704.701903.54710HepG2EIF3D
GDNFENSG00000168621.1028.514504.078102.805603.532702.75960HepG2EIF4B
GDNFENSG00000168621.107.6978025.64470-1.736102.211501.44800HepG2EIF4G1
GDNFENSG00000168621.1017.2318066.20830-1.941906.648505.78330HepG2ETF1
GDNFENSG00000168621.1025.4320079.73430-1.648605.336502.67500HepG2FASTKD1
GDNFENSG00000168621.1012.9385078.42360-2.599606.136604.62640HepG2FTO
GDNFENSG00000168621.1035.207704.227703.057905.233804.30300HepG2FXR1
GDNFENSG00000168621.1011.2953088.77200-2.974409.541908.40060HepG2GPKOW
GDNFENSG00000168621.10179.8071084.541601.088604.886903.41330HepG2GRSF1
GDNFENSG00000168621.1024.6255079.10460-1.683605.942203.73980HepG2HNRNPD
GDNFENSG00000168621.1026.768203.974602.751503.523502.74050HepG2HNRNPK
GDNFENSG00000168621.1020.5664084.71550-2.042306.759605.82450HepG2HNRNPLL
GDNFENSG00000168621.1076.494503.741504.3536010.791108.95600HepG2IGF2BP3
GDNFENSG00000168621.1030.4444089.03270-1.548205.138503.31210HepG2ILF3
GDNFENSG00000168621.1018.2499087.03600-2.253709.290206.95540HepG2KHDRBS1
GDNFENSG00000168621.10104.9059032.733701.680106.305205.04090HepG2LARP4
GDNFENSG00000168621.1018.658604.229202.141301.989501.42900HepG2MAGOH
GDNFENSG00000168621.1019.951304.252102.230102.055901.50600HepG2MATR3
GDNFENSG00000168621.1044.9014013.175001.768902.456301.46280HepG2METAP2
GDNFENSG00000168621.109.4363027.75770-1.556602.158301.43940HepG2MSI2
GDNFENSG00000168621.1014.2677086.36960-2.597808.175606.47910HepG2MTPAP
GDNFENSG00000168621.1047.855508.635902.470204.629303.19540HepG2NONO
GDNFENSG00000168621.105.3253075.10680-3.8180011.4290010.00170HepG2NSUN2
GDNFENSG00000168621.1024.1596083.47470-1.788705.776104.46020HepG2PABPC1
GDNFENSG00000168621.1077.6021027.959601.472703.945602.95340HepG2PARN
GDNFENSG00000168621.1028.633001.692304.080606.757005.87330HepG2PCBP1
GDNFENSG00000168621.1016.7162044.84250-1.423602.928202.13500HepG2PRPF4
GDNFENSG00000168621.1026.536001.723903.944105.630504.90570HepG2PTBP1
GDNFENSG00000168621.1052.7291026.117201.013502.360301.80430HepG2PUM1
GDNFENSG00000168621.10579.6804022.229704.7046062.7704059.97330HepG2RAVER1
GDNFENSG00000168621.1024.1721088.20810-1.867606.915504.57090HepG2RBM47
GDNFENSG00000168621.1025.001401.916903.705104.742704.06900HepG2NELFE
GDNFENSG00000168621.1021.509301.788303.588204.224103.48380HepG2RECQL
GDNFENSG00000168621.1066.9207012.250702.449507.439306.49030HepG2RPS19
GDNFENSG00000168621.1030.0791091.71940-1.608505.745604.59110HepG2RPS3A
GDNFENSG00000168621.10137.037207.172704.2558022.4645020.63720HepG2RRP9
GDNFENSG00000168621.1030.9316086.36930-1.481404.898603.16190HepG2SART3
GDNFENSG00000168621.1014.2719087.11980-2.6098010.360807.64540HepG2SBDS
GDNFENSG00000168621.1040.7190012.294001.727703.072102.07930HepG2SERBP1
GDNFENSG00000168621.1020.6359083.85940-2.022806.798205.73310HepG2SF3B1
GDNFENSG00000168621.1026.269101.791303.874204.109203.41190HepG2SF3B4
GDNFENSG00000168621.1063.4433029.334401.112802.895202.23910HepG2SMN1
GDNFENSG00000168621.1087.3942022.764201.940707.845406.19630HepG2SMNDC1
GDNFENSG00000168621.1033.5948093.30550-1.473704.163103.19590HepG2SNRNP70
GDNFENSG00000168621.1032.523301.871104.119406.639505.98360HepG2SRSF1
GDNFENSG00000168621.1021.767601.523503.836605.333904.61230HepG2SRSF9
GDNFENSG00000168621.105.2753054.25970-3.362609.828108.97590HepG2SSB
GDNFENSG00000168621.1012.7699064.69530-2.340905.415603.96470HepG2TBRG4
GDNFENSG00000168621.105.8802027.44270-2.222503.326202.78660HepG2TIAL1
GDNFENSG00000168621.1058.0557027.695101.067702.594402.04440HepG2TRIM56
GDNFENSG00000168621.1065.3997029.350701.155802.241801.67050HepG2U2AF1
GDNFENSG00000168621.103.7135019.00310-2.355402.181001.54850HepG2UPF1
GDNFENSG00000168621.1020.8401082.15430-1.979007.616405.79650HepG2XPO5
GDNFENSG00000168621.1058.6039021.891401.420502.786201.51420HepG2XRCC5
GDNFENSG00000168621.1055.3746022.242001.315803.124701.74110HepG2ZRANB2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GDNF is not available on ENCORE database.






No RBPs affect the alternative splcing events of GDNF on ENCORE database.





The Knockdown/knockout RNA-Seq assay for GDNF is not avaliable on ENCORE database.