| RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
|---|
| Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
|---|---|---|---|---|---|---|---|---|
| chr1 | 7831580 | 7831709 | + | intron-Distal | 6.61365 | 15.75774 | HepG2 | EFTUD2 |
| chr1 | 7837375 | 7837446 | + | CDS,intron-Proximal | 5.35334 | 8.03507 | K562 | AQR |
| chr1 | 7838197 | 7838361 | + | CDS,intron-Distal,intron-Proximal | 3.23598 | 7.26597 | K562 | PRPF8 |
| chr1 | 7838218 | 7838300 | + | CDS,intron-Proximal | 4.67206 | 7.15298 | K562 | AQR |
| chr1 | 7833463 | 7833558 | + | 5'-UTR,CDS,intron-Proximal | 3.54478 | 6.28932 | HepG2 | AQR |
| chr1 | 7840267 | 7840308 | + | 3'-UTR | 5.45496 | 6.28020 | HepG2 | FUBP3 |
| chr1 | 7831709 | 7831810 | + | intron-Distal | 4.24192 | 6.10859 | HepG2 | EFTUD2 |
| chr1 | 7840302 | 7840383 | + | 3'-UTR | 3.46282 | 6.00918 | K562 | FAM120A |
| chr1 | 7840308 | 7840353 | + | 3'-UTR | 3.77016 | 5.80402 | HepG2 | FUBP3 |
| chr1 | 7838156 | 7838218 | + | CDS,intron-Proximal | 4.01285 | 5.47926 | K562 | AQR |
| Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
| Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
|---|---|---|---|---|---|---|---|---|---|
| VAMP3 | ENSG00000049245.8 | 609.67820 | 2928.94390 | -2.26430 | 127.04370 | 124.06240 | HepG2 | QKI | |
| VAMP3 | ENSG00000049245.8 | 1059.84520 | 3098.63550 | -1.54780 | 85.01980 | 82.60510 | HepG2 | ETF1 | |
| VAMP3 | ENSG00000049245.8 | 956.31350 | 2512.07320 | -1.39330 | 61.71420 | 59.49830 | HepG2 | CELF1 | |
| VAMP3 | ENSG00000049245.8 | 539.24740 | 2681.98950 | -2.31430 | 60.60570 | 57.99040 | HepG2 | IGF2BP2 | |
| VAMP3 | ENSG00000049245.8 | 1262.21590 | 2701.30580 | -1.09770 | 58.12280 | 55.65110 | HepG2 | DAZAP1 | |
| VAMP3 | ENSG00000049245.8 | 932.33200 | 1987.94270 | -1.09240 | 42.37240 | 40.32950 | HepG2 | UPF1 | |
| VAMP3 | ENSG00000049245.8 | 3714.50020 | 2186.36140 | 0.76450 | 37.52410 | 36.11060 | HepG2 | ZNF622 | |
| VAMP3 | ENSG00000049245.8 | 949.20990 | 1956.75330 | -1.04370 | 37.69290 | 35.68050 | HepG2 | HNRNPU | |
| VAMP3 | ENSG00000049245.8 | 1317.63850 | 2539.79240 | -0.94680 | 36.22040 | 34.85420 | HepG2 | SSB | |
| VAMP3 | ENSG00000049245.8 | 1280.47980 | 2641.52700 | -1.04470 | 34.87800 | 33.17470 | HepG2 | TAF15 | |
| Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
| Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE | VAMP3 | ENSG00000049245.8 | chr1 | + | 7833131 | 7833258 | 7831328 | 7831445 | 7833501 | 7833571 | 0.18800 | 0.00000 | 0.00000 | included | K562 | AQR | |||
| MXE | VAMP3 | ENSG00000049245.8 | chr1 | + | 7833501 | 7833571 | 7837219 | 7837378 | 7831328 | 7831445 | 7838177 | 7838229 | -0.15500 | 0.00024 | 0.00261 | 2included | K562 | AQR |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".