| RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
|---|
| Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
|---|---|---|---|---|---|---|---|---|
| chr1 | 112168419 | 112168487 | + | intron-Distal | 6.11665 | 16.83057 | HepG2 | PTBP1 |
| chr1 | 112168423 | 112168487 | + | intron-Distal | 6.66653 | 16.14543 | K562 | PTBP1 |
| chr1 | 112255146 | 112255253 | + | 3'-UTR | 3.67888 | 14.02720 | K562 | PUM2 |
| chr1 | 112240048 | 112240058 | + | intron-Proximal | 5.48159 | 13.37136 | K562 | U2AF2 |
| chr1 | 112240058 | 112240096 | + | CDS,intron-Proximal | 4.58911 | 13.26717 | K562 | U2AF2 |
| chr1 | 112233955 | 112234013 | + | 3'-UTR,CDS,intron-Proximal | 3.68551 | 12.00587 | K562 | DDX3X |
| chr1 | 112162522 | 112162558 | + | 5'-UTR,intron-Distal,intron-Proximal | 4.02640 | 9.77030 | K562 | DDX3X |
| chr1 | 112168385 | 112168423 | + | intron-Distal | 4.77850 | 9.03914 | K562 | PTBP1 |
| chr1 | 112191090 | 112191182 | + | intron-Distal | 4.25880 | 8.81208 | HepG2 | SUGP2 |
| chr1 | 112220565 | 112220686 | + | intron-Distal | 3.54755 | 8.47371 | K562 | KHSRP |
| Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
| Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
|---|---|---|---|---|---|---|---|---|---|
| RAP1A | ENSG00000116473.10 | 332.73170 | 873.63570 | -1.39270 | 20.28030 | 18.77290 | HepG2 | EIF2S1 | |
| RAP1A | ENSG00000116473.10 | 2675.16380 | 1405.03100 | 0.92890 | 16.36780 | 15.08700 | K562 | PUS1 | |
| RAP1A | ENSG00000116473.10 | 2048.97110 | 1361.47560 | 0.58960 | 13.01280 | 11.88030 | K562 | AGGF1 | |
| RAP1A | ENSG00000116473.10 | 322.48440 | 613.39360 | -0.92760 | 9.73400 | 8.49970 | HepG2 | HNRNPC | |
| RAP1A | ENSG00000116473.10 | 523.75690 | 965.53290 | -0.88240 | 8.94250 | 7.79850 | HepG2 | EIF4A3 | |
| RAP1A | ENSG00000116473.10 | 838.63660 | 575.82220 | 0.54230 | 8.10070 | 7.29290 | HepG2 | ZNF622 | |
| RAP1A | ENSG00000116473.10 | 718.76610 | 1155.45640 | -0.68490 | 8.49600 | 7.09550 | K562 | GPKOW | |
| RAP1A | ENSG00000116473.10 | 510.81450 | 903.62060 | -0.82290 | 8.17790 | 7.06560 | HepG2 | G3BP1 | |
| RAP1A | ENSG00000116473.10 | 849.49990 | 1256.27000 | -0.56450 | 9.26700 | 6.99790 | K562 | EIF2S1 | |
| RAP1A | ENSG00000116473.10 | 479.08900 | 923.83390 | -0.94730 | 8.71860 | 6.85500 | HepG2 | KHSRP | |
| Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
| Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE | RAP1A | ENSG00000116473.10 | chr1 | + | 112249284 | 112249399 | 112246964 | 112247108 | 112251770 | 112251886 | 0.06900 | 0.00000 | 0.00000 | included | K562 | SRSF1 | |||
| A5SS | RAP1A | ENSG00000116473.10 | chr1 | + | 112233955 | 112234039 | 112233955 | 112233986 | 112237962 | 112238031 | -0.05600 | 0.00073 | 0.04380 | shorter | K562 | SRSF1 | |||
| SE | RAP1A | ENSG00000116473.10 | chr1 | + | 112170091 | 112170185 | 112162398 | 112162556 | 112233955 | 112234039 | -0.17600 | 0.00182 | 0.07061 | excluded | K562 | HNRNPK |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".