LCORL

General Information

Gene Name : LCORL
Gene ID : ENSG00000178177.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: LCORL)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	LCORL	ENSG00000178177.15	4.89	3.55	4.22	ENCSR000AEF
HepG2	LCORL	ENSG00000178177.15	2.99	6.28	4.63	ENCSR985KAT
K562	LCORL	ENSG00000178177.15	6.66	7.46	7.06	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for LCORL is not avaliable on ENCORE database.

Proteins bound to RNA

LCORL RNA is bound by 22 proteins.

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eCLIP assay for LCORL is not avaliable on ENCORE database.

22 proteins are bound to LCORL RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr4	17999370	17999440	-	intron-Distal	8.08839	53.26055	K562	QKI
chr4	18011943	18012043	-	intron-Distal	4.87588	22.77814	K562	HNRNPL
chr4	17885212	17885315	-	3'-UTR,intron-Distal	4.81205	14.72456	K562	TARDBP
chr4	17956337	17956473	-	intron-Distal	4.38712	14.02890	HepG2	SUGP2
chr4	18011984	18012034	-	intron-Distal	4.67429	12.76474	K562	AGGF1
chr4	17999328	17999432	-	intron-Distal	6.00457	11.86079	HepG2	QKI
chr4	18003304	18003403	-	intron-Distal	5.55474	11.80112	K562	KHSRP
chr4	17956652	17956737	-	intron-Distal	3.85925	10.49455	HepG2	SUGP2
chr4	17904171	17904241	-	intron-Distal	4.27804	8.75974	K562	KHSRP
chr4	17930514	17930601	-	intron-Distal	4.39245	8.75493	K562	KHSRP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 87 entries

eCLIP assay for LCORL is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for LCORL is not available on ENCORE database.
80 RBPs can affect the levels of LCORL.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for LCORL is not available on ENCORE database.

80 RBPs can affect the gene expression of LCORL :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
LCORL	ENSG00000178177.10	359.59580	812.68940	-1.17630	23.29350	21.65610	K562	FXR1
LCORL	ENSG00000178177.10	325.19730	675.62410	-1.05490	14.77050	12.92940	K562	CPSF6
LCORL	ENSG00000178177.10	168.75630	351.11980	-1.05700	11.71840	10.54330	HepG2	HNRNPU
LCORL	ENSG00000178177.10	186.51260	364.67050	-0.96730	10.72840	9.59450	HepG2	SMN1
LCORL	ENSG00000178177.10	294.79440	574.98180	-0.96380	10.58960	9.48390	K562	HNRNPC
LCORL	ENSG00000178177.10	255.92130	460.69950	-0.84810	9.40860	8.34700	HepG2	SRSF5
LCORL	ENSG00000178177.10	268.84400	458.43970	-0.77000	7.80850	6.83140	HepG2	CELF1
LCORL	ENSG00000178177.10	285.42600	488.80920	-0.77620	7.98210	6.70780	HepG2	NOL12
LCORL	ENSG00000178177.10	136.86570	279.78640	-1.03160	7.64820	6.68670	HepG2	RPS19
LCORL	ENSG00000178177.10	317.70760	495.31800	-0.64070	7.18990	6.32650	HepG2	PUM1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 92 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for LCORL is not available on ENCORE database.

14 RBPs can affect the splicing of LCORL :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	LCORL	ENSG00000178177.10	chr4	-	17887690	17887784			17842821	17847524	17910716	17910968	-0.38800	0.00001	0.00131	excluded	K562	EFTUD2
SE	LCORL	ENSG00000178177.10	chr4	-	17887690	17887784			17842821	17847524	17910716	17910968	-0.44200	0.00002	0.00145	excluded	K562	PRPF8
SE	LCORL	ENSG00000178177.10	chr4	-	17961887	17961934			17910716	17910968	17963525	17963655	0.06700	0.00006	0.02708	included	K562	PUM1
SE	LCORL	ENSG00000178177.10	chr4	-	17887690	17887784			17842821	17847524	17910716	17910968	-0.35200	0.00012	0.00541	excluded	HepG2	SF3A3
SE	LCORL	ENSG00000178177.10	chr4	-	17887690	17887784			17842821	17847524	17910716	17910968	0.48600	0.00018	0.01651	included	HepG2	SRSF9
SE	LCORL	ENSG00000178177.10	chr4	-	17964592	17964672			17963516	17963655	17974442	17974508	-0.13700	0.00024	0.02196	excluded	K562	HNRNPL
SE	LCORL	ENSG00000178177.10	chr4	-	17910716	17910968			17847119	17847524	17963525	17963655	-0.14100	0.00047	0.01058	excluded	K562	U2AF2
SE	LCORL	ENSG00000178177.10	chr4	-	17964592	17964672			17963525	17963655	17974442	17974508	0.06300	0.00068	0.08086	included	K562	LARP4
MXE	LCORL	ENSG00000178177.10	chr4	-	17887690	17887784	17910716	17910968	17882251	17886375	17963525	17963655	-0.28300	0.00145	0.07846	2included	HepG2	G3BP1
SE	LCORL	ENSG00000178177.10	chr4	-	17887690	17887784			17842821	17847524	17963525	17963655	-0.19100	0.00186	0.05064	excluded	K562	AKAP8L

Showing 1 to 10 of 14 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

LCORL

General Information

Functions

Localization

Domains (AlphaFold: LCORL)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for LCORL is not avaliable on ENCORE database.

22 proteins are bound to LCORL RNA:

eCLIP assay for LCORL is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for LCORL is not available on ENCORE database.

80 RBPs can affect the gene expression of LCORL :

The Knockdown/knockout RNA-Seq assay for LCORL is not available on ENCORE database.

14 RBPs can affect the splicing of LCORL :

The Knockdown/knockout RNA-Seq assay for LCORL is not avaliable on ENCORE database.