GPS2

General Information

Gene Name : GPS2
Gene ID : ENSG00000132522.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: GPS2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GPS2	ENSG00000132522.15	22.35	31.78	27.07	ENCSR000AEF
HepG2	GPS2	ENSG00000132522.15	58.22	48.06	53.14	ENCSR985KAT
K562	GPS2	ENSG00000132522.15	42.57	41.39	41.98	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GPS2 is not avaliable on ENCORE database.

Proteins bound to RNA

GPS2 RNA is bound by 15 proteins.

CanvasJS.com

eCLIP assay for GPS2 is not avaliable on ENCORE database.

15 proteins are bound to GPS2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	7217182	7217255	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.73030	21.09127	HepG2	PRPF8
chr17	7218232	7218301	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.73236	13.82681	HepG2	PRPF8
chr17	7217021	7217089	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.45124	12.28583	HepG2	EFTUD2
chr17	7217396	7217462	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.04753	11.83519	HepG2	PPIG
chr17	7216990	7217080	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.14595	11.30643	HepG2	SF3A3
chr17	7217000	7217089	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.38847	11.21358	HepG2	SF3B4
chr17	7217806	7217849	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.29083	9.44903	HepG2	PPIG
chr17	7217000	7217094	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.66871	8.93732	K562	SF3B4
chr17	7216848	7216890	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.44339	8.72621	HepG2	PRPF8
chr17	7217706	7217720	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.87716	6.91190	HepG2	PPIG
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 39 entries

eCLIP assay for GPS2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for GPS2 is not available on ENCORE database.
65 RBPs can affect the levels of GPS2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for GPS2 is not available on ENCORE database.

65 RBPs can affect the gene expression of GPS2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GPS2	ENSG00000132522.11	2085.06770	1119.57270	0.89700	27.65980	25.80980	K562	DDX47
GPS2	ENSG00000132522.11	515.15910	215.83910	1.25500	18.24490	16.13760	K562	EIF3G
GPS2	ENSG00000132522.11	342.41800	643.08180	-0.90920	14.62190	13.53270	HepG2	SRSF9
GPS2	ENSG00000132522.11	515.00170	257.10030	1.00210	12.56480	11.37060	K562	FXR1
GPS2	ENSG00000132522.11	985.04240	553.73820	0.83090	11.49390	10.35000	K562	HNRNPC
GPS2	ENSG00000132522.11	1036.83590	562.02970	0.88340	11.35370	10.30170	K562	PUS1
GPS2	ENSG00000132522.11	1103.84760	602.67590	0.87300	12.04030	9.90520	K562	SAFB
GPS2	ENSG00000132522.11	450.87400	787.80990	-0.80510	11.01240	9.88560	HepG2	QKI
GPS2	ENSG00000132522.11	679.28740	1050.84860	-0.62950	10.48690	9.68130	HepG2	SRFBP1
GPS2	ENSG00000132522.11	933.83520	539.10330	0.79250	10.37160	9.27070	HepG2	RPS19
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 76 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for GPS2 is not available on ENCORE database.

39 RBPs can affect the splicing of GPS2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
A3SS	GPS2	ENSG00000132522.11	chr17	-	7217398	7217524	7217398	7217478	7217609	7217722	0.06600	0.00000	longer	K562	AQR
A3SS	GPS2	ENSG00000132522.11	chr17	-	7215977	7216223	7215977	7216158	7216347	7216443	0.18500	0.00000	longer	K562	AQR
RI	GPS2	ENSG00000132522.11	chr17	-	7216886	7217307	7216886	7217040	7217224	7217307	0.26700	0.00004	included	HepG2	PCBP2
RI	GPS2	ENSG00000132522.11	chr17	-	7217806	7218438	7217806	7217916	7218277	7218438	0.21300	0.00000	included	K562	PUS1
RI	GPS2	ENSG00000132522.11	chr17	-	7216886	7217307	7216886	7217040	7217224	7217307	0.27700	0.00000	included	K562	PUS1
RI	GPS2	ENSG00000132522.11	chr17	-	7216347	7216610	7216347	7216443	7216530	7216610	0.25500	0.00000	included	K562	PUS1
RI	GPS2	ENSG00000132522.11	chr17	-	7216886	7217478	7216886	7217307	7217398	7217478	0.27900	0.00000	included	K562	PUS1
RI	GPS2	ENSG00000132522.11	chr17	-	7216886	7217478	7216886	7217307	7217398	7217478	0.13500	0.00001	included	HepG2	SF3A3
RI	GPS2	ENSG00000132522.11	chr17	-	7216347	7216610	7216347	7216443	7216530	7216610	0.16100	0.00011	included	K562	PRPF8
RI	GPS2	ENSG00000132522.11	chr17	-	7216886	7217307	7216886	7217040	7217224	7217307	0.19800	0.00001	included	HepG2	PCBP1

Showing 1 to 10 of 84 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GPS2

General Information

Functions

Localization

Domains (AlphaFold: GPS2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GPS2 is not avaliable on ENCORE database.

15 proteins are bound to GPS2 RNA:

eCLIP assay for GPS2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GPS2 is not available on ENCORE database.

65 RBPs can affect the gene expression of GPS2 :

The Knockdown/knockout RNA-Seq assay for GPS2 is not available on ENCORE database.

39 RBPs can affect the splicing of GPS2 :

The Knockdown/knockout RNA-Seq assay for GPS2 is not avaliable on ENCORE database.