ELP3

General Information

Gene Name : ELP3
Gene ID : ENSG00000134014.16
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ELP3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ELP3	ENSG00000134014.16	31.36	29.75	30.55	ENCSR000AEF
HepG2	ELP3	ENSG00000134014.16	31.84	39.83	35.84	ENCSR985KAT
K562	ELP3	ENSG00000134014.16	34.30	43.91	39.10	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ELP3 is not avaliable on ENCORE database.

Proteins bound to RNA

ELP3 RNA is bound by 12 proteins.

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eCLIP assay for ELP3 is not avaliable on ENCORE database.

12 proteins are bound to ELP3 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	28008834	28008894	+	intron-Distal	3.49077	7.20487	HepG2	SUGP2
chr8	27954754	27954827	+	5'-UTR,CDS,intron-Distal	3.34992	6.60490	HepG2	BCLAF1
chr8	28009385	28009461	+	intron-Distal	3.12909	6.35394	HepG2	SUGP2
chr8	28048102	28048157	+	3'-UTR	4.04823	6.14808	K562	UPF1
chr8	27976815	27976930	+	intron-Distal	3.31205	6.14017	HepG2	HNRNPL
chr8	28009079	28009138	+	intron-Distal	4.74221	6.10726	HepG2	SUGP2
chr8	28017861	28017922	+	3'-UTR,CDS,intron-Proximal	3.53759	6.06436	HepG2	BCLAF1
chr8	28033342	28033379	+	intron-Distal	4.66473	6.05753	HepG2	SUGP2
chr8	28025525	28025569	+	intron-Distal	4.83263	5.72853	HepG2	HNRNPM
chr8	28047616	28047678	+	3'-UTR	3.42971	5.65632	K562	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 36 entries

eCLIP assay for ELP3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ELP3 is not available on ENCORE database.
70 RBPs can affect the levels of ELP3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ELP3 is not available on ENCORE database.

70 RBPs can affect the gene expression of ELP3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ELP3	ENSG00000134014.12	825.89470	1681.10620	-1.02540	29.94460	28.56440	HepG2	NELFE
ELP3	ENSG00000134014.12	824.83890	1572.67000	-0.93100	24.93460	23.46120	HepG2	SF3B4
ELP3	ENSG00000134014.12	846.68870	1565.74560	-0.88690	23.21050	21.73030	HepG2	RECQL
ELP3	ENSG00000134014.12	462.14950	1086.01390	-1.23260	17.33820	15.87430	HepG2	GPKOW
ELP3	ENSG00000134014.12	931.48650	1510.56990	-0.69750	14.43700	13.37890	HepG2	PTBP1
ELP3	ENSG00000134014.12	826.93210	1484.74330	-0.84440	14.62270	13.13880	HepG2	RBM25
ELP3	ENSG00000134014.12	559.19030	1065.84920	-0.93060	13.92400	12.11470	K562	GPKOW
ELP3	ENSG00000134014.12	367.19110	833.50450	-1.18270	12.82380	11.54610	HepG2	SUPV3L1
ELP3	ENSG00000134014.12	1008.69550	1635.95100	-0.69760	12.61240	11.42040	HepG2	QKI
ELP3	ENSG00000134014.12	965.77120	1484.51950	-0.62020	12.40730	11.27100	HepG2	PCBP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 76 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ELP3 is not available on ENCORE database.

12 RBPs can affect the splicing of ELP3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ELP3	ENSG00000134014.12	chr8	+	28017307	28017502			28016084	28016150	28017745	28017973	0.10800	0.00000	0.00001	included	K562	AQR
SE	ELP3	ENSG00000134014.12	chr8	+	28017311	28017502			28016084	28016150	28017745	28017973	0.12400	0.00000	0.00012	included	K562	RBM15
SE	ELP3	ENSG00000134014.12	chr8	+	28017311	28017502			28016084	28016150	28017745	28017973	0.13800	0.00000	0.00017	included	K562	AGGF1
SE	ELP3	ENSG00000134014.12	chr8	+	27965429	27965493			27964229	27964300	27967886	27967955	-0.12000	0.00001	0.00017	excluded	K562	AQR
SE	ELP3	ENSG00000134014.12	chr8	+	27965429	27965493			27964229	27964300	27967886	27967955	-0.15900	0.00001	0.00025	excluded	K562	U2AF1
MXE	ELP3	ENSG00000134014.12	chr8	+	27967886	27967955	27970535	27970690	27964229	27964300	27987018	27987180	0.13600	0.00001	0.00015	1included	K562	AQR
SE	ELP3	ENSG00000134014.12	chr8	+	28040710	28040781			28019513	28019595	28047165	28047604	0.06700	0.00006	0.00692	included	HepG2	SRSF9
SE	ELP3	ENSG00000134014.12	chr8	+	27954735	27954835			27950618	27950750	27957344	27957483	-0.15500	0.00011	0.00261	excluded	K562	PUS1
SE	ELP3	ENSG00000134014.12	chr8	+	28017307	28017502			28016084	28016150	28017745	28017973	0.10800	0.00036	0.01563	included	K562	UTP18
MXE	ELP3	ENSG00000134014.12	chr8	+	27954735	27954835	27957344	27957483	27950628	27950750	27964229	27964300	-0.13900	0.00141	0.06806	2included	HepG2	DDX3X

Showing 1 to 10 of 24 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ELP3

General Information

Functions

Localization

Domains (AlphaFold: ELP3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ELP3 is not avaliable on ENCORE database.

12 proteins are bound to ELP3 RNA:

eCLIP assay for ELP3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ELP3 is not available on ENCORE database.

70 RBPs can affect the gene expression of ELP3 :

The Knockdown/knockout RNA-Seq assay for ELP3 is not available on ENCORE database.

12 RBPs can affect the splicing of ELP3 :

The Knockdown/knockout RNA-Seq assay for ELP3 is not avaliable on ENCORE database.