EBPL

General Information

Gene Name : EBPL
Gene ID : ENSG00000123179.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: EBPL)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	EBPL	ENSG00000123179.13	26.48	27.09	26.79	ENCSR000AEF
HepG2	EBPL	ENSG00000123179.13	57.10	95.82	76.46	ENCSR985KAT
K562	EBPL	ENSG00000123179.13	24.10	28.93	26.52	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for EBPL is not avaliable on ENCORE database.

Proteins bound to RNA

EBPL RNA is bound by 11 proteins.

CanvasJS.com

eCLIP assay for EBPL is not avaliable on ENCORE database.

11 proteins are bound to EBPL RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr13	50265425	50265574	-	5'-UTR,CDS,intron-Distal	4.88951	75.26200	HepG2	DDX3X
chr13	50265501	50265595	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.36007	16.49042	HepG2	RPS3
chr13	50265203	50265344	-	intron-Distal	5.03059	16.46266	HepG2	EFTUD2
chr13	50265437	50265501	-	CDS,intron-Distal	4.35275	12.18649	HepG2	RPS3
chr13	50237131	50237201	-	CDS,intron-Distal,intron-Proximal	5.50974	9.40852	HepG2	PRPF8
chr13	50234886	50234973	-	3'-UTR,intron-Distal,intron-Proximal	5.51270	6.23813	HepG2	SUB1
chr13	50235286	50235345	-	3'-UTR,CDS,intron-Distal	3.20599	5.54400	K562	YBX3
chr13	50247898	50247990	-	intron-Distal	3.68227	5.35398	HepG2	QKI
chr13	50235243	50235335	-	3'-UTR,CDS,intron-Distal	3.70626	5.31724	HepG2	SND1
chr13	50235166	50235210	-	3'-UTR,CDS,intron-Distal	3.76527	5.20772	HepG2	LARP4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 17 entries

eCLIP assay for EBPL is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for EBPL is not available on ENCORE database.
86 RBPs can affect the levels of EBPL.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for EBPL is not available on ENCORE database.

86 RBPs can affect the gene expression of EBPL :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
EBPL	ENSG00000123179.9	238.84580	1377.81300	-2.52820	64.99400	62.18290	HepG2	NCBP2
EBPL	ENSG00000123179.9	383.61420	1453.22080	-1.92150	43.87260	41.67330	HepG2	DDX3X
EBPL	ENSG00000123179.9	307.00460	694.09860	-1.17690	19.82490	18.70930	HepG2	TIAL1
EBPL	ENSG00000123179.9	524.45880	1241.28870	-1.24290	18.95490	17.28790	HepG2	G3BP1
EBPL	ENSG00000123179.9	494.44930	1137.01370	-1.20140	16.94500	15.36520	HepG2	RBM25
EBPL	ENSG00000123179.9	572.75640	1200.06290	-1.06710	14.86510	13.55940	HepG2	EIF2S1
EBPL	ENSG00000123179.9	545.95350	1156.68280	-1.08310	14.37750	13.32140	HepG2	PTBP1
EBPL	ENSG00000123179.9	593.68300	1252.89230	-1.07750	14.16080	12.90470	HepG2	QKI
EBPL	ENSG00000123179.9	667.52090	1261.71610	-0.91850	12.06590	10.76630	HepG2	IGF2BP2
EBPL	ENSG00000123179.9	454.53360	741.82670	-0.70670	11.48800	10.31790	HepG2	SMN1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 95 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for EBPL is not available on ENCORE database.

8 RBPs can affect the splicing of EBPL :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	EBPL	ENSG00000123179.9	chr13	-	50243912	50243982	50237192	50237331	50265389	50265599	-0.29200	0.00000	0.00000	excluded	HepG2	SF3A3
SE	EBPL	ENSG00000123179.9	chr13	-	50243912	50243982	50237192	50237331	50265389	50265599	0.15100	0.00001	0.00018	included	HepG2	U2AF2
SE	EBPL	ENSG00000123179.9	chr13	-	50237192	50237331	50234858	50235344	50265389	50265574	-0.08500	0.00029	0.07879	excluded	HepG2	BCLAF1
SE	EBPL	ENSG00000123179.9	chr13	-	50243912	50243982	50237192	50237331	50265389	50265599	0.14900	0.00051	0.02776	included	HepG2	SFPQ
SE	EBPL	ENSG00000123179.9	chr13	-	50243912	50243982	50237192	50237331	50265389	50265599	-0.10500	0.00109	0.09194	excluded	HepG2	DDX59
SE	EBPL	ENSG00000123179.9	chr13	-	50237192	50237331	50234858	50235344	50265389	50265574	-0.07500	0.00198	0.09870	excluded	HepG2	RBM22
SE	EBPL	ENSG00000123179.9	chr13	-	50243912	50243982	50234858	50235344	50265389	50265599	-0.40600	0.00444	0.04211	excluded	K562	AQR
SE	EBPL	ENSG00000123179.9	chr13	-	50243912	50243982	50237192	50237331	50265389	50265599	0.07300	0.00444	0.08084	included	HepG2	SRSF1

Showing 1 to 8 of 8 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

EBPL

General Information

Functions

Localization

Domains (AlphaFold: EBPL)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for EBPL is not avaliable on ENCORE database.

11 proteins are bound to EBPL RNA:

eCLIP assay for EBPL is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for EBPL is not available on ENCORE database.

86 RBPs can affect the gene expression of EBPL :

The Knockdown/knockout RNA-Seq assay for EBPL is not available on ENCORE database.

8 RBPs can affect the splicing of EBPL :

The Knockdown/knockout RNA-Seq assay for EBPL is not avaliable on ENCORE database.