CKMT1B

General Information

Gene Name       : CKMT1B
Gene ID             : ENSG00000237289.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CKMT1B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CKMT1BENSG00000237289.90.090.160.12ENCSR000AEF
HepG2CKMT1BENSG00000237289.91.852.111.98ENCSR985KAT
K562CKMT1BENSG00000237289.912.257.169.71ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CKMT1B is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on CKMT1B RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CKMT1B is not avaliable on ENCORE database.






NO known proteins are bound to CKMT1B RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CKMT1B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CKMT1B is not available on ENCORE database.

  • 86 RBPs can affect the levels of CKMT1B.  








The Knockdown/knockout RNA-Seq assay for CKMT1B is not available on ENCORE database.





86 RBPs can affect the gene expression of CKMT1B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CKMT1BENSG00000237289.5140.8366029.134002.2731010.845009.85920HepG2AKAP1
CKMT1BENSG00000237289.56.4490053.54730-3.053707.857006.91250HepG2BOP1
CKMT1BENSG00000237289.5288.1714050.384702.5158023.2357020.63960HepG2CCAR1
CKMT1BENSG00000237289.5110.7519024.488502.1771011.9769010.79040HepG2CKAP4
CKMT1BENSG00000237289.5386.2539027.913303.7904051.0813048.73130HepG2DDX3X
CKMT1BENSG00000237289.5142.5978055.825201.352905.052103.74330HepG2DDX59
CKMT1BENSG00000237289.56.5941027.10170-2.039102.890501.89120HepG2DHX30
CKMT1BENSG00000237289.5106.2792023.051102.204909.506108.44550HepG2EIF2S1
CKMT1BENSG00000237289.5171.9672036.667902.2294016.0010014.15910HepG2EIF4G2
CKMT1BENSG00000237289.56.5209057.12470-3.131009.132608.14500HepG2ETF1
CKMT1BENSG00000237289.5223.3664032.780902.7684026.5569023.78540HepG2FASTKD2
CKMT1BENSG00000237289.545.423307.007502.696406.015404.37080HepG2GRSF1
CKMT1BENSG00000237289.59.3034028.36820-1.608401.938601.38690HepG2HNRNPA1
CKMT1BENSG00000237289.510.3576053.18550-2.360305.463304.60960HepG2HNRNPLL
CKMT1BENSG00000237289.552.295508.300502.655305.119203.46340HepG2HSPD1
CKMT1BENSG00000237289.511.7192031.65160-1.433401.942701.32780HepG2IGF2BP1
CKMT1BENSG00000237289.56.1273025.69950-2.068402.650202.00810HepG2MAGOH
CKMT1BENSG00000237289.5165.7087025.846202.6805016.4919015.04940HepG2MATR3
CKMT1BENSG00000237289.5136.9517030.394002.1717010.358908.89550HepG2MSI2
CKMT1BENSG00000237289.5157.6594026.457402.5750015.9591014.52130HepG2NCBP2
CKMT1BENSG00000237289.584.6325031.133401.442603.214502.03020HepG2NONO
CKMT1BENSG00000237289.516.0768047.15610-1.552502.600201.87360HepG2NSUN2
CKMT1BENSG00000237289.590.0297022.384302.007806.959604.40170HepG2PHF6
CKMT1BENSG00000237289.5201.8968029.730102.7635020.6252017.88690HepG2PRPF6
CKMT1BENSG00000237289.571.7209026.133801.456403.469802.57530HepG2PRPF8
CKMT1BENSG00000237289.579.3275038.960201.025702.701902.03900HepG2PUM2
CKMT1BENSG00000237289.59.1514027.70180-1.597902.016901.47100HepG2QKI
CKMT1BENSG00000237289.56.1490027.28850-2.149902.394701.73580HepG2RAVER1
CKMT1BENSG00000237289.5107.5948027.699901.957609.009707.58070HepG2RBM15
CKMT1BENSG00000237289.54.8350026.81360-2.471403.520802.45670HepG2RPS10
CKMT1BENSG00000237289.544.8377021.126601.085501.891501.37480HepG2RPS19
CKMT1BENSG00000237289.510.1628027.91490-1.457702.017201.45330HepG2SAFB2
CKMT1BENSG00000237289.515.5495040.38820-1.377102.198601.59620HepG2SF3A3
CKMT1BENSG00000237289.516.1404052.64550-1.705603.749802.94040HepG2SF3B1
CKMT1BENSG00000237289.591.896708.251503.477207.846405.84790HepG2SSRP1
CKMT1BENSG00000237289.596.4494025.085701.942805.538303.85100HepG2STAU1
CKMT1BENSG00000237289.56.3970033.73630-2.398803.692002.92650HepG2SUPV3L1
CKMT1BENSG00000237289.561.7734022.958501.427904.041703.03650HepG2TIA1
CKMT1BENSG00000237289.573.1500030.731001.251102.832602.26360HepG2TRIM56
CKMT1BENSG00000237289.510.8984035.87830-1.719002.806501.92840HepG2TUFM
CKMT1BENSG00000237289.5208.2321034.581002.5900024.9733023.44770HepG2UTP3
CKMT1BENSG00000237289.58.5803030.01440-1.806602.774801.71840HepG2XRCC6
CKMT1BENSG00000237289.5173.25070259.39350-0.582303.038801.99570K562AKAP8
CKMT1BENSG00000237289.5660.44190245.644001.4268022.4124020.21840K562AKAP8L
CKMT1BENSG00000237289.5134.84130360.00060-1.4167012.4163011.30140K562AQR
CKMT1BENSG00000237289.567.33080355.82070-2.4018029.5081026.84270K562BOP1
CKMT1BENSG00000237289.5505.40980270.190000.903404.083502.75370K562CCAR1
CKMT1BENSG00000237289.5229.42270378.33040-0.721605.213704.14480K562CPSF6
CKMT1BENSG00000237289.5121.47780202.05500-0.734102.794901.73100K562CSTF2
CKMT1BENSG00000237289.5306.78520614.06950-1.0012012.2005010.23350K562CELF1
CKMT1BENSG00000237289.597.07990228.50310-1.235005.593202.91040K562DAZAP1
CKMT1BENSG00000237289.5131.63100233.44040-0.826604.831403.06740K562DDX27
CKMT1BENSG00000237289.5190.88220520.65740-1.4477012.3080011.04020K562DDX47
CKMT1BENSG00000237289.5140.77280252.30670-0.841802.469101.60860K562EFTUD2
CKMT1BENSG00000237289.5248.96920162.906700.611803.476302.10550K562EIF2S1
CKMT1BENSG00000237289.5152.62780377.06950-1.3048011.9906010.64710K562EIF2S2
CKMT1BENSG00000237289.594.87270270.23930-1.510205.852704.26890K562EIF3D
CKMT1BENSG00000237289.5405.29880125.595801.690108.111905.23180K562FASTKD2
CKMT1BENSG00000237289.5207.09010413.11100-0.996302.062801.32680K562FIP1L1
CKMT1BENSG00000237289.5151.65030384.95970-1.344006.752505.39570K562FMR1
CKMT1BENSG00000237289.5203.86150326.29560-0.678603.906402.80410K562FTO
CKMT1BENSG00000237289.557.00040105.88640-0.893502.726702.02640K562G3BP2
CKMT1BENSG00000237289.5228.49710361.20530-0.660604.321503.33550K562GPKOW
CKMT1BENSG00000237289.5347.12760502.53760-0.533803.369702.53740K562GRSF1
CKMT1BENSG00000237289.5145.06040362.97570-1.323204.556903.18500K562HNRNPA1
CKMT1BENSG00000237289.5151.67040321.44630-1.083604.747703.00840K562HNRNPA2B1
CKMT1BENSG00000237289.5367.61260572.47320-0.639003.259701.53640K562HNRNPAB
CKMT1BENSG00000237289.5458.27800225.233901.024709.274208.23170K562HNRNPC
CKMT1BENSG00000237289.5237.81000402.02400-0.757503.090702.14950K562HNRNPU
CKMT1BENSG00000237289.5207.96830560.18620-1.429503.514402.62050K562HSPD1
CKMT1BENSG00000237289.559.51460153.42950-1.366308.050005.89110K562IGF2BP3
CKMT1BENSG00000237289.5280.17950158.121600.825204.210103.05260K562MATR3
CKMT1BENSG00000237289.5463.31750352.579700.394002.081101.32070K562METAP2
CKMT1BENSG00000237289.5863.49980532.387700.697607.298005.50540K562MSI2
CKMT1BENSG00000237289.5367.43780546.30680-0.572203.953702.14660K562NOL12
CKMT1BENSG00000237289.5287.09770448.48080-0.643502.102401.44220K562NSUN2
CKMT1BENSG00000237289.5430.76950219.819600.970507.067204.74580K562PHF6
CKMT1BENSG00000237289.5245.60030397.82320-0.695802.954601.34190K562PKM
CKMT1BENSG00000237289.5289.22870513.21060-0.827306.849204.75680K562PNPT1
CKMT1BENSG00000237289.5645.98730221.567601.5437012.558409.33330K562PRPF6
CKMT1BENSG00000237289.5127.27960245.52100-0.947802.844002.08520K562PRPF8
CKMT1BENSG00000237289.5389.14890579.59640-0.574704.615603.21090K562PUM1
CKMT1BENSG00000237289.5367.84890567.94470-0.626605.613904.22900K562PUM2
CKMT1BENSG00000237289.5365.94890243.645600.586801.961901.48980K562PUS1
CKMT1BENSG00000237289.539.16800101.00680-1.366704.043002.27730K562RAVER1
CKMT1BENSG00000237289.5422.66170237.367700.832307.635806.68090K562RBM15
CKMT1BENSG00000237289.5257.67510476.46510-0.886808.229105.53430K562RBM17
CKMT1BENSG00000237289.582.16640147.56730-0.844802.726401.89210K562RBM22
CKMT1BENSG00000237289.5388.63030184.086401.0779010.703808.74390K562RCC2
CKMT1BENSG00000237289.599.84510155.30640-0.637402.391201.38990K562NELFE
CKMT1BENSG00000237289.5193.44390385.50220-0.994804.203601.57040K562DROSHA
CKMT1BENSG00000237289.5109.43270251.11020-1.198303.218601.78570K562RRP9
CKMT1BENSG00000237289.5225.19530442.67890-0.975103.553202.63690K562SF3A3
CKMT1BENSG00000237289.5140.08500343.54530-1.2942010.419108.45330K562SF3B1
CKMT1BENSG00000237289.556.41780110.00520-0.963303.728602.73140K562SF3B4
CKMT1BENSG00000237289.5374.20170572.47930-0.613403.194301.30560K562SMN1
CKMT1BENSG00000237289.588.99360150.94990-0.762303.082002.33930K562SRSF1
CKMT1BENSG00000237289.589.12610353.26660-1.9868012.224408.73710K562SUPT6H
CKMT1BENSG00000237289.582.98830237.84090-1.519006.387004.79680K562SUPV3L1
CKMT1BENSG00000237289.5332.40520194.227300.775102.144301.33090K562TIAL1
CKMT1BENSG00000237289.5215.64660475.54130-1.140903.443302.64720K562UPF1
CKMT1BENSG00000237289.5214.12860385.29210-0.847503.187001.37100K562UPF2
CKMT1BENSG00000237289.5132.63850512.34090-1.9496026.1477023.18080K562UTP3
CKMT1BENSG00000237289.5241.47750423.20700-0.809502.667001.83450K562WDR43
CKMT1BENSG00000237289.5768.23340426.587900.8486010.788008.43110K562WRN
CKMT1BENSG00000237289.5187.78790347.56370-0.888203.404501.59050K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CKMT1B is not available on ENCORE database.






No RBPs affect the alternative splcing events of CKMT1B on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CKMT1B is not avaliable on ENCORE database.